The rational development of nanostructured materials (defined as materials with features in the 1 -100 nm range) has allowed for the advancement of a number of fields linked to analytical chemistry. Among those, the separation of compounds can be significantly influenced by the large surface-to-volume ratios and outstanding surface properties (area, roughness, energetics, and electron distributions) of these materials. Moreover, a careful selection of the composition and morphology of the materials allows tuning their capacity to interact with other molecules via hydrogen bonds, -stacking, dispersion forces, dative bonds, and hydrophobic interactions. In order to highlight some of these potential advancements, this Focus Issue of ELECTROPHORESIS is dedicated to the use of Nanostructured Materials as Separation Media and will be followed by a full issue in 2017.To open this issue, it is important to mention that one of the critical parameters of these materials is their potential to diffuse through pores. While this phenomenon can be studied by a number of techniques, G. Wang's group explored the feasibility of confocal fluorescence correlation spectroscopy to study small nanoparticle diffusion in hundred-nanometer-sized cylindrical pores and found that the confined two-dimensional lateral diffusion and the unconfined one-dimensional (1D) axial diffusion can be observed in both original intensity traces and autocorrelation functions. They also demonstrated that the diffusion of 45-nm nanoparticles in 300 nm pores can be satisfactorily explained by hydrodynamic frictions [1]. Along these lines, the diffusiophoresis of a charge-regulating porous sphere is analytically described for the first time by Keh's group [2]. Specifically, the electrokinetic equations governing the electric potential, ionic electrochemical potential, and fluid velocity distributions were solved as power-series expansions in the basic fixed charge density and highlighted the differences between these particles and those with impermeable properties. Complementing these results, the lateral migration of 5 m particles, dispersed in a polyethylene oxide viscoelastic solution and then injected into a straight rectangular channel containing water (Newtonian sheath flow) was experimentally investigated by Li's group [3]. According to this report, by using viscoelastic sample flow and Newtonian sheath flow, a selective particle lateral migration can be achieved in a simple straight channel, without any external force fields. As examples of the potential advantages of the unique optical properties of nanomaterials, Jiang's group [4] developed a histidine-containing peptide ligand (ATTO 590-E2G (NH) 6 ) that binds to CdSe/ZnS QDs and could provide a new path for the detection of metallic cations. Using similar chemistry, this group also developed an in-capillary assay for simultaneous detection of the assembly and disassembly of a multivalent tag (conjugated with quantum dots by metal-affinity) and antibody [5]. The issue also includes a report describ...