Monocytes and macrophages differentiate from progenitor cells under the influence of colony-stimulating factors. Genome-scale data have enabled the identification of the set of genes that distinguishes macrophages from other cell types and the ways in which thousands of genes are regulated in response to pathogen challenge. Although there has been a focus on a small subset of lineage-enriched transcription factors, such as PU.1, more than one-half of the transcription factors in the genome can be expressed in macrophage lineage cells under some state of activation, and they interact in a complex network. The network architecture is conserved across species, but many of the target genes evolve rapidly and differ between mouse and human. The data and publication deluge related to macrophage biology require the development of new analytical tools and ways of presenting information in an accessible form. The website www.macrophages. com is a community website that partly fills this niche. J. Leukoc. Biol. 92: 433-444; 2012.
MACROPHAGE BIOLOGY-A HISTORICAL PERSPECTIVEIt is an extraordinary honor to receive the Bonazinga Award from the Society of Leukocyte Biology. The list of previous awardees on the Society website reads like a "who's who" of the most influential people I have known in my field, including two of my direct mentors, Siamon Gordon and Josh Fidler. In this plenary perspective, I do not intend to try and review the field of macrophage biology. I will start where I started in the field-with the identification of markers of mononuclear phagocytes. I will progress through a discussion as to why I consider the use of such markers misleading, because they are not correlated with underlying functions, and macrophages are infinitely heterogeneous. And, I will end, where I am now-with the data deluge and progress toward understanding transcriptional networks.
THE CELLS OF THE MONONUCLEAR PHAGOCYTE SYSTEMThe MPS was defined as a family of cells of the innate immune system derived from hematopoietic progenitor cells under the influence of specific growth factors. Differentiated cells of the MPS, monocytes, and macrophages, are major effectors of innate immunity, engulfing and killing pathogens. They are also needed for tissue repair and resolution of inflammation. Their biology and differentiation have been reviewed by a number of authors [1][2][3][4]. The original definition of the MPS considered an essentially linear sequence, from pluripotent progenitors through committed myeloid progenitors shared with granulocytes to promonocytes and blood monocytes and thence, to tissue macrophages (reviewed in ref.[5]). The number of monocyte-derived macrophages in tissues was considered to increase by recruitment in response to a wide range of inflammatory challenges, and the function of these recruited macrophages varied depending on the nature of the stimulus.Challenges to the unified concept of a MPS have been discussed elsewhere [3]. The clear separation from polymorphonuclear cells implied by the term mononucl...