Objective: To study the epidemiology of diabetes among Saskatchewan First Nations and non-First Nations children. Methods: Using administrative databases from years 1980 to 2005, this population based study compared diabetes incidence, prevalence and mortality by year, age and sex between First Nations and non-First Nations children aged 0 to 19. Results: We identified 320 First Nations and 2136 non-First Nations children with diabetes. The overall age-adjusted incidence of diabetes was similar for non-First Nations boys, non-First Nations girls and First Nations boys at approximately 30/100 000; however, it averaged 46.3/100 000 for First Nations girls and peaked at 68.7/100 000 for years 2001 to 2003. By 2003 to 2005, the age-adjusted diabetes prevalence/100 000 was 260 for First Nations girls, 205 for non-First Nations girls, 232 for First Nations boys and 256 for non-First Nations Boys. Prevalence more than tripled among First Nations children over the study period while less than doubling among non-First Nations children. First Nations girls aged 15 to 19 experienced the highest diabetes prevalence of 741/100 000 in 2000. Conclusion: First Nations children are experiencing an epidemic of diabetes that affects female adolescents disproportionately. More effective primary and secondary prevention initiatives are urgently required, with particular attention to maternal health, to slow current trends, and to stem a looming increase in chronic diabetic complications.