“…Data are not available on the actual nutrient composition of these diets. Dietary protein, nitrogen free extract and fiber concentrations and sources, and the ratio of protein to carbohydrate (i.e., nitrogen free extract) have all been shown to alter microbial populations of cats and dogs [2], [4], [30], [31], [32], [33], For example, Middelbos et al [4] reported data similar to ours for laboratory dogs fed diets containing 7.5% beet pulp (total dietary fiber: 4.5% DM) compared to control diets containing no supplemental fiber (total dietary fiber: 1.4% DM): The proportions of Actinobacteria (0.8 vs 1.4% of sequences) and Fusobacteria (24 vs 40% of sequences) were decreased (P<0.05) compared to control dogs, while Firmicutes were increased (28 vs 15% of sequences; P<0.05). There is growing evidence that the proportions of gastrointestinal microbes are altered in some disease states when compared with healthy dogs [28], [34], [35], [36].…”