2011
DOI: 10.1007/s10561-011-9240-x
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Development of a data entry auditing protocol and quality assurance for a tissue bank database

Abstract: Human transcription error is an acknowledged risk when extracting information from paper records for entry into a database. For a tissue bank, it is critical that accurate data are provided to researchers with approved access to tissue bank material. The challenges of tissue bank data collection include manual extraction of data from complex medical reports that are accessed from a number of sources and that differ in style and layout. As a quality assurance measure, the Breast Cancer Tissue Bank (http:\\www.a… Show more

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Cited by 8 publications
(6 citation statements)
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References 7 publications
(7 reference statements)
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“…Although the Apple Macintosh Unix and Linux environments are popular in genomic research, Windows based informatics tools also exist [20], [21], [22]. BiSA for Windows exploits the power of today's multi-core personal computers.…”
Section: Discussionmentioning
confidence: 99%
“…Although the Apple Macintosh Unix and Linux environments are popular in genomic research, Windows based informatics tools also exist [20], [21], [22]. BiSA for Windows exploits the power of today's multi-core personal computers.…”
Section: Discussionmentioning
confidence: 99%
“…The JPEG converted images, produced by Snapshot Creator, are fed through the Deep Zoom converter tool to create tiles of images at various resolutions. Deep Zoomed images are then published on the website and linked to our customised version of the Caisis database [7].…”
Section: Deep Zoommentioning
confidence: 99%
“…After the successful creation of JPEG images from the NDPI files, Snapshot Creator links the snapshots to the database using the filename of the image. The filename is an identifier of the slide in the ABCTB customised open source cancer-research database, Caisis [7], wherein histology slides are recorded as specimens. A stored procedure updates the matched field of the Specimens table.…”
Section: Integration With Caisismentioning
confidence: 99%
“…Therefore, a further level of quality control should be implemented in the biobank, using internal and external auditing-based processes. 36 Next-generation biobanks face big challenges, as networks within networks are generated. Indeed, the possibility of sharing the data worldwide, while maintaining the public's and law makers' interests of each country and guaranteeing individuals' privacy, still remains a major concern.…”
mentioning
confidence: 99%