2012
DOI: 10.1021/jm300801u
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Design, Synthesis, and Structure–Activity Relationships of Highly Potent 5-HT3 Receptor Ligands

Abstract: The 5-HT3 receptor, a pentameric ligand-gated ion channel (pLGIC), is an important therapeutic target. During a recent fragment screen, 6-chloro-N-methyl-2-(4-methyl-1,4-diazepan-1-yl)quinazolin-4-amine (1) was identified as a 5-HT3R hit fragment. Here we describe the synthesis and structure–activity relationships (SAR) of a series of (iso)quinoline and quinazoline compounds that were synthesized and screened for 5-HT3R affinity using a [3H]granisetron displacement assay. These studies resulted in the discover… Show more

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Cited by 33 publications
(27 citation statements)
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“…The minimum energy conformation (three least energy conformations for each compound) of each designed molecule was generated by ACDLABS‐10.0/3D Viewer (CHARMM parameterization), and the pharmacophoric distances were measured from centroid of 1,8 naphthyridine ring to oxygen of the carbonyl group, carbonyl oxygen to basic nitrogen atom (N4 of piperazines), and centroid of 1,8 naphthyridine ring to basic nitrogen. The observed distances between the pharmacophoric elements of all the designed compounds are in agreement with the earlier proposed pharmacophore model (Figure ; ) for 5‐HT 3 receptor antagonists. Lipophilicity is an important parameter to be considered while designing compound to manifest drug‐like behavior.…”
Section: Physical Constants Of Synthesized Compounds 8a‐8osupporting
confidence: 90%
See 1 more Smart Citation
“…The minimum energy conformation (three least energy conformations for each compound) of each designed molecule was generated by ACDLABS‐10.0/3D Viewer (CHARMM parameterization), and the pharmacophoric distances were measured from centroid of 1,8 naphthyridine ring to oxygen of the carbonyl group, carbonyl oxygen to basic nitrogen atom (N4 of piperazines), and centroid of 1,8 naphthyridine ring to basic nitrogen. The observed distances between the pharmacophoric elements of all the designed compounds are in agreement with the earlier proposed pharmacophore model (Figure ; ) for 5‐HT 3 receptor antagonists. Lipophilicity is an important parameter to be considered while designing compound to manifest drug‐like behavior.…”
Section: Physical Constants Of Synthesized Compounds 8a‐8osupporting
confidence: 90%
“…Thus, synthesis of a series of novel 1,8‐naphthyridine‐3‐carboxamides as 5‐HT 3 receptor antagonists was pursued with an intent to examine the antidepressant activity of these compounds. The proposed pharmacophoric elements (Figure ) that are necessary for 5‐HT 3 receptor antagonistic activity are an aromatic moiety, a basic moiety, and an intervening hydrogen bond acceptor moiety arranged at specific distances . Our earlier studies have indicated that nitrogen containing fused six‐membered aromatic ring (aromatic moiety) may constitute a suitable template in the design of novel 5‐HT 3 receptor antagonists .…”
Section: Physical Constants Of Synthesized Compounds 8a‐8omentioning
confidence: 99%
“…The effects of m CPBG at 5-HT 3 A receptors have been reported by several groups, and indeed in one study it was changed from an agonist into an antagonist by mutations in the orthosteric binding site (Spang et al ., 2000; Price et al ., 2008; Verheij et al ., 2012). These studies were performed in rodent receptors where m CPBG has a maximal current response similar to that of 5-HT.…”
Section: Discussionmentioning
confidence: 99%
“…Homology modeling : Construction of the homomeric 5-HT 3 A receptor binding site model has been previously described 18. Using the same approach, a model of the 5-HT 3 AB receptor binding site was constructed by homology modeling using MOE (version 2010.10, Chemical Computing Group, Montreal).…”
Section: Methodsmentioning
confidence: 99%