Description of Algoriphagus aquimarinus sp. nov., Algoriphagus chordae sp. nov. and Algoriphagus winogradskyi sp. nov., from sea water and algae, transfer of Hongiella halophila Yi and Chun 2004 to the genus Algoriphagus as Algoriphagus halophilus comb. nov. and emended descriptions of the genera Algoriphagus Bowman et al. 2003 and Hongiella Yi and Chun 2004

Nedashkovskaya, Olga I.; Vancanneyt, Marc; Trappen, Stefanie Van; Vandemeulebroecke, Katrien; Lysenko, Anatoly M.; Rohde, Manfred; Falsen, Enevold; Frolova, Galina M.; Mikhailov, Valery V.; Swings, Jean

doi:10.1099/ijs.0.02915-0

Cited by 88 publications

(68 citation statements)

References 22 publications

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“…The quinone system comprised menaquinone MK-7 (99.4 %) as the predominant component, with MK-6 as a trace component (0.6 %). This is in accordance with the emended description of the genus Algoriphagus provided by Nedashkovskaya et al (2004). The profile of major polar lipids comprised phosphatidylethanolamine, and an unknown polar lipid and an unknown aminolipid (exhibiting almost identical chromatographic behaviour; Fig.…”

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confidence: 65%

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Algoriphagus olei sp. nov., isolated from oil-contaminated soil

Young

Lin

Arun

et al. 2009

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLO

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A motile, Gram-negative, pinkish red-pigmented bacterium (strain CC-Hsuan-617 T ) was isolated from an oil-contaminated soil near an oil refinery located in Kaohsiung County, Taiwan. 16S rRNA gene sequence analysis showed that strain CC-Hsuan-617T clustered with Algoriphagus mannitolivorans (97.5 % sequence similarity), Algoriphagus aquatilis (98.0 %) and Algoriphagus boritolerans (97.5 %), followed by Algoriphagus ornithinivorans (97.1 %) and Algoriphagus alkaliphilus (97.1 %). The fatty acid profile of the novel strain was slightly different from those reported for recognized Algoriphagus species. The quinone system contained menaquinone MK-7 as the predominant component. The major polar lipids were phosphatidylethanolamine, an unknown polar lipid, an unknown phospholipid and an unknown aminophospholipid. The main cell polyamine was sym-homospermidine; lesser amounts of spermine and spermidine were also found. The results of DNA-DNA hybridization, and physiological and biochemical tests allowed the genotypic and phenotypic differentiation of strain CC-Hsuan-617 T from recognized Algoriphagus species. Strain CC-Hsuan-617

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confidence: 65%

“…On the basis of the data presented, we consider that strain CC-Hsuan-617 T represents a novel species of the genus Nedashkovskaya et al (2004Nedashkovskaya et al ( , 2006Nedashkovskaya et al ( , 2007, Tiago et al (2006) and Yoon et al (2005aYoon et al ( , b, 2006 Algoriphagus, for which the name Algoriphagus olei sp. nov. is proposed.…”

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confidence: 99%

Algoriphagus olei sp. nov., isolated from oil-contaminated soil

Young

Lin

Arun

et al. 2009

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLO

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“…Lewin & Lounsbery (1969), Reichenbach (1989), Raj & Maloy (1990), Bowman et al (2003), Nedashkovskaya et al (2003bNedashkovskaya et al ( , 2004, Brettar et al (2004), Yi & Chun (2004), Yoon et al (2004), Van Trappen et al (2004) …”

Section: Description Of Roseivirga Gen Novmentioning

confidence: 99%

“…A single strain of the dark-orange-pigmented agarolytic bacterium Reichenbachia agariperforans, inhabiting coastal waters of the Sea of Japan, was described (Nedashkovskaya et al, 2003b). Also, rose-pigmented representatives of the genera Algoriphagus and Hongiella have been recovered from different sources from saline lakes and marine environments (Bowman et al, 2003;Yi & Chun, 2004;Nedashkovskaya et al, 2004;Van Trappen et al, 2004). The pink-coloured bacterium Belliella baltica was isolated from surface water of the central Baltic Sea (Brettar et al, 2004).…”

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confidence: 99%

Roseivirga ehrenbergii gen. nov., sp. nov., a novel marine bacterium of the phylum ‘Bacteroidetes’, isolated from the green alga Ulva fenestrata

Nedashkovskaya

Kim

Lee

et al. 2005

International Journal of Systematic and Evolutionary Microbiology

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The taxonomic position of a novel marine bacterium isolated from the green alga Ulva fenestrata collected in the Sea of Japan was established. Cells of the strain studied, designated KMM 6017T, were strictly aerobic, heterotrophic, pink-pigmented, non-motile by gliding, Gram-negative and oxidase-, catalase-, β-galactosidase- and alkaline phosphatase-positive. 16S rRNA gene sequence analysis indicated that the strain occupied a distinct lineage within the phylum ‘Bacteroidetes’ and formed a cluster with [Flexibacter] tractuosus and Reichenbachia agariperforans. The G+C content of the DNA of KMM 6017T was 40·2 mol%. The major respiratory quinone was MK-7. The predominant fatty acids were i15 : 1, i15 : 0 and i17 : 0 3-OH (34·2, 24 and 7·7 %, respectively). On the basis of phenotypic, chemotaxonomic, genotypic and phylogenetic characteristics, the novel bacterium was assigned to the genus Roseivirga gen. nov., as Roseivirga ehrenbergii gen. nov., sp. nov. The type strain is KMM 6017T (=KCTC 12282T=LMG 22567T).

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“…The predominant cellular fatty acids of strain HW001 T were iso-C 15 : 0 (29.15 %), iso-C 15 : 0 , summed feature 9 (iso-C 17 : 1 v9c, 22.25 %), C 16 : 0 (7.0 %) and summed feature 3 (C 16 : 1 v7c/C 16 : 1 v6c, 6.44 %) (Table S3), while the principal cellular fatty acids for the reference strain were C 16 : 0 (31.1 %) and C 18 : 1 v7c/ C 18 : 1 v6c (31.86 %). Quinone composition was characterized by HPLC as described previously (Nedashkovskaya et al, 2004b). The main isoprenoid quinone of strain HW001 T was Q-8 (ca.…”

mentioning

confidence: 99%

Permianibacter aggregans gen. nov., sp. nov., a bacterium of the family Pseudomonadaceae capable of aggregating potential biofuel-producing microalgae

Wang

Zheng

Hill

et al. 2014

International Journal of Systematic and Evolutionary Microbiology

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A novel bacterial strain, capable of aggregating potential biofuel-producing microalgae, was isolated from the phycosphere of an algal culture and designated HW001T. The novel bacterial strain was identified on the basis of its phylogenetic, genotypic, chemotaxonomic and phenotypic characteristics in this study. Cells were aerobic, Gram-negative rods. 16S rRNA gene-based phylogenetic analysis revealed that strain HW001T is affiliated with the family Pseudomonadaceae in the phylum Proteobacteria , but forms a distinct clade within this family. The DNA G+C content of strain HW001T was 55.4 mol%. The predominant cellular fatty acids were iso-C15 : 0, summed feature 9 (iso-C17 : 1ω9c), C16 : 0 and summed feature 3 (C16 : 1ω7c/C16 : 1ω6c). Q-8 was the main respiratory quinone. The polar lipid profile contained phosphatidylethanolamine, an unidentified aminophospholipid and some unidentified lipids. Based on the extensive polyphasic analysis, strain HW001T represents a novel species of a new genus in the family Pseudomonadaceae , for which the name Permianibacter aggregans gen. nov., sp. nov., is proposed. The type strain of the type species is HW001T ( = CICC 10856T = KCTC 32485T).

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Cited by 88 publications

References 22 publications

Algoriphagus olei sp. nov., isolated from oil-contaminated soil

Algoriphagus olei sp. nov., isolated from oil-contaminated soil

Roseivirga ehrenbergii gen. nov., sp. nov., a novel marine bacterium of the phylum ‘Bacteroidetes’, isolated from the green alga Ulva fenestrata

Permianibacter aggregans gen. nov., sp. nov., a bacterium of the family Pseudomonadaceae capable of aggregating potential biofuel-producing microalgae

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