the duplication and deletion mutations of the S-SCAM/MAGI-2 gene are associated with schizophrenia and infantile spasms, respectively. S-SCAM is a unique synaptic scaffolding protein that localizes to both excitatory and GABAergic synapses. However, consequences of aberrant S-SCAM expression on GABAergic synapses is little studied. Here we report the effect of S-SCAM knockdown and overexpression on GABAergic synapses. S-ScAM knockdown in cultured hippocampal neurons caused a drastic loss of both pre-and post-synaptic components of GABAergic synapses, indicating its essential role in GABAergic synapse formation and maintenance. Surprisingly, S-ScAM overexpression also attenuated GABAergic synapses, but the effect is mediated by the loss of postsynaptic GABA A receptors, gephyrin, and neuroligin 2 and does not involve presynaptic component vesicular GABA transporters. overexpression studies using S-ScAM mutants with various domain deletions indicated that GABAergic synapse loss correlates with their ability to increase excitatory synaptic function. Consistently, AMPA receptor antagonist CNQX or calcineurin inhibitor FK506 abolished the S-SCAM overexpression-induced loss of GABA A receptors, supporting that GABAergic synapse loss by S-ScAM overexpression is due to the activity-induced dispersal of synaptic GABA A receptors. these results suggest that abnormal S-ScAM protein levels disrupt excitation/inhibition balance in neurons, which may explain the pathogenic nature of S-SCAM copy number variations. Maintaining proper balance in excitation and inhibition (E/I) is critical for circuit functionality and thus brain function 1. Disruption of the E/I balance is implicated for numerous diseases including schizophrenia 2 , autism 3 , and epilepsy 4. However, not much is known for the cell-autonomous mechanism by which the balance of excitatory and inhibitory synapses is maintained in neurons 5-7. Scaffolding proteins play crucial roles at synapses in the assembly of signaling complexes, trafficking and clustering of receptors, stabilization of synapses, and dynamic turnover of synaptic components 8. Synaptic scaffolding molecule (S-SCAM), also known as membrane-associated guanylate kinase inverted 2 (MAGI-2), is a major synaptic scaffolding protein that consists of six PDZ domains, one guanylate kinase (GK) domain, and two WW domains 9. S-SCAM interacts with numerous proteins at synapses including transmembrane AMPA receptor regulatory protein (TARP), guanylate kinase associated protein (GKAP), neuroligins, Axin, β-catenin, and ErbB4 10. Overexpression of S-SCAM in excitatory neurons specifically enhances AMPA receptor (AMPAR)-mediated synaptic transmission through TARP 11,12 , without altering NMDA receptor (NMDAR) and presynaptic function 11. Conversely, S-SCAM knockdown induced the loss of synaptic AMPARs and excitatory synapses. Therefore, S-SCAM is a critical scaffolding protein that controls the strength of excitatory synaptic transmission by regulating the amount of AMPARs at synapses. Importantly, the overexpres...