DeepCorr: a novel error correction method for 3GS long reads based on deep learning
Rongshu Wang,
Jianhua Chen
Abstract:Long reads generated by third-generation sequencing (3GS) technologies are involved in many biological analyses and play a vital role due to their ultra-long read length. However, the high error rate affects the downstream process. DeepCorr, a novel error correction algorithm for data from both PacBio and ONT platforms based on deep learning is proposed. The core algorithm adopts a recurrent neural network to capture the long-term dependencies in the long reads to convert the problem of long-read error correct… Show more
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