Abstract:Platform trials have become increasingly popular for drug development programs, attracting interest from statisticians, clinicians and regulatory agencies.Many statistical questions related to designing platform trials-such as the impact of decision rules, sharing of information across cohorts, and allocation ratios on operating characteristics and error rates-remain unanswered. In many platform trials, the definition of error rates is not straightforward as classical error rate concepts are not applicable. Fo… Show more
“…Multi-drug treatments can result in therapeutic benefits both by enhancing the treatment efficacy and by avoiding the acquisition of monotherapy resistance ( 7–10 ). Historically, drug combinations have been identified using a trial-and-error method that requires considerable time and may lead to sub-optimal results ( 7 , 11 , 12 ). High-throughput screening (HTS) technologies have enabled a more systematic and accelerated discovery of new drug combination candidates ( 4 , 9 , 13–15 ).…”
SynergyFinder (https://synergyfinder.fimm.fi) is a free web-application for interactive analysis and visualization of multi-drug combination response data. Since its first release in 2017, SynergyFinder has become a popular tool for multi-dose combination data analytics, partly because the development of its functionality and graphical interface has been driven by a diverse user community, including both chemical biologists and computational scientists. Here, we describe the latest upgrade of this community-effort, SynergyFinder release 3.0, introducing a number of novel features that support interactive multi-sample analysis of combination synergy, a novel consensus synergy score that combines multiple synergy scoring models, and an improved outlier detection functionality that eliminates false positive results, along with many other post-analysis options such as weighting of synergy by drug concentrations and distinguishing between different modes of synergy (potency and efficacy). Based on user requests, several additional improvements were also implemented, including new data visualizations and export options for multi-drug combinations. With these improvements, SynergyFinder 3.0 supports robust identification of consistent combinatorial synergies for multi-drug combinatorial discovery and clinical translation.
“…Multi-drug treatments can result in therapeutic benefits both by enhancing the treatment efficacy and by avoiding the acquisition of monotherapy resistance ( 7–10 ). Historically, drug combinations have been identified using a trial-and-error method that requires considerable time and may lead to sub-optimal results ( 7 , 11 , 12 ). High-throughput screening (HTS) technologies have enabled a more systematic and accelerated discovery of new drug combination candidates ( 4 , 9 , 13–15 ).…”
SynergyFinder (https://synergyfinder.fimm.fi) is a free web-application for interactive analysis and visualization of multi-drug combination response data. Since its first release in 2017, SynergyFinder has become a popular tool for multi-dose combination data analytics, partly because the development of its functionality and graphical interface has been driven by a diverse user community, including both chemical biologists and computational scientists. Here, we describe the latest upgrade of this community-effort, SynergyFinder release 3.0, introducing a number of novel features that support interactive multi-sample analysis of combination synergy, a novel consensus synergy score that combines multiple synergy scoring models, and an improved outlier detection functionality that eliminates false positive results, along with many other post-analysis options such as weighting of synergy by drug concentrations and distinguishing between different modes of synergy (potency and efficacy). Based on user requests, several additional improvements were also implemented, including new data visualizations and export options for multi-drug combinations. With these improvements, SynergyFinder 3.0 supports robust identification of consistent combinatorial synergies for multi-drug combinatorial discovery and clinical translation.
“…Based on the proposed design, comprehensive simulations were run for two scenarios: monotherapy (one dose) versus control and combination therapy versus monotherapies versus control. We will present results of the former in this paper and results of the latter can be found in [24,29].…”
Section: Plos Onementioning
confidence: 89%
“…Therefore, the FDA guidance advises that phase 2b studies demonstrate efficacy on a histological endpoint after at least 12-18 months of treatment, given that histological change takes an extended period of time to occur using a range of doses to support phase 3 dose selection. Therefore, members of EU-PEARL are currently developing a master protocol (see Table 1) to support a phase 2b platform trial in NASH and this paper, as well as a previously published simulation study [24], describe the initiative's efforts to simulate the performance of the parameters used to make decisions on whether or not the treatment being evaluated is effective.…”
Non-alcoholic steatohepatitis (NASH) is the progressive form of nonalcoholic fatty liver disease (NAFLD) and a disease with high unmet medical need. Platform trials provide great benefits for sponsors and trial participants in terms of accelerating drug development programs. In this article, we describe some of the activities of the EU-PEARL consortium (EU Patient-cEntric clinicAl tRial pLatforms) regarding the use of platform trials in NASH, in particular the proposed trial design, decision rules and simulation results. For a set of assumptions, we present the results of a simulation study recently discussed with two health authorities and the learnings from these meetings from a trial design perspective. Since the proposed design uses co-primary binary endpoints, we furthermore discuss the different options and practical considerations for simulating correlated binary endpoints.
“…Based on the feedback of the trial stakeholders, several iterations might be needed until an optimal design addressing the various needs is found. Different aspects and risk minimisation can be of interest, e.g., the type 1 error rate on platform or sub-study level might be of regulatory interest, 18 the average and maximum sample sizes required are relevant for budgeting and portfolio optimisation.…”
Section: Improving Efficiency Through Adaptive Clinical Trial Designmentioning
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