“…Sunitinib and regorafenib are respectively licensed as second and third line agents for GIST [1]. However, it is difficult to collate how GIST genotype predicts patient response to these two drugs because these patients would, by definition, have progressed on imatinib therapy and for the most part, have therefore manifested secondary KIT or PDGFRA mutations [14,27,28]. Not only would it then be difficult to determine whether and how the primary and secondary mutations affected drug sensitivity but it is well recognised that secondary mutations may be heterogeneous between different tumour deposits and even within the same deposit [6,29].…”