“…The estimated carriage rate in communities reaches between 25 and 30% (Charlebois et al, 2002; Levy et al, 2005; Kuehnert et al, 2006; Li et al, 2014; Morgenstern et al, 2016). Regardless of its commensal nature, in predisposed individuals, such as newborns, young children, the elderly, immuno-compromised, post-surgical, or hospitalized ones, S. aureus is often a cause of difficult to treat and not rarely fatal as well as chronic infections, especially in clinical setting (Anstead et al, 2014; Savini et al, 2016). Community and livestock-associated S. aureus populations are of utmost importance for genetic elements exchange, in particular for dissemination of antibiotic determinants, and thus reservoirs of potentially life-threatening strains (Vandenesch et al, 2003; Armand-Lefevre et al, 2005; Voss et al, 2005; Nimmo, 2012; Planet et al, 2013; Strauß et al, 2017).…”