CTP synthase (CTPsyn) plays an essential role in DNA, RNA, and lipid synthesis. Recent studies in bacteria, yeast, and Drosophila all reveal a polymeric CTPsyn structure, which dynamically regulates its enzymatic activity. However, the molecular mechanism underlying the formation of CTPsyn polymers is not completely understood. In this study, we found that reversible ubiquitination regulates the dynamic assembly of the filamentous structures of Drosophila CTPsyn. We further determined that the proto-oncogene Cbl, an E3 ubiquitin ligase, controls CTPsyn filament formation in endocycles. While the E3 ligase activity of Cbl is required for CTPsyn filament formation, Cbl does not affect the protein levels of CTPsyn. It remains unclear whether the regulation of CTPsyn filaments by Cbl is through direct ubiquitination of CTPsyn. In the absence of Cbl or with knockdown of CTPsyn, the progression of the endocycle-associated S phase was impaired. Furthermore, overexpression of wild-type, but not enzymatically inactive CTPsyn, rescued the endocycle defect in Cbl mutant cells. Together, these results suggest that Cbl influences the nucleotide pool balance and controls CTPsyn filament formation in endocycles. This study links Cbl-mediated ubiquitination to the polymerization of a metabolic enzyme and reveals a role for Cbl in endocycles during Drosophila development. KEYWORDS Cbl; CTP synthase; cytoophidia; endocycle; Drosophila P ROVIDING the raw material for DNA/RNA replication is a key challenge faced by all organisms during rapid growth. One particularly interesting example of this challenge is polyploidy, which arises from endoreplication and is essential for the normal development and specific physiological conditions of many diploid organisms. Organisms often use endoreplication, a type of cell cycle encompassing genomic replication without cell division, to provide nutrients to support the developing egg/embryo and enlarged cell size. Examples of cells and tissues that endocycle include mammalian trophoblast giant cells, plant seeds/roots, and Drosophila egg chambers (Edgar and Orr-Weaver 2001;Lee et al. 2009). In Drosophila, embryogenesis requires the mass production of proteins and high metabolic activity, which are achieved through endoreplication in the terminally differentiated cells of the developing egg chamber.Drosophila oogenesis provides an excellent system for analyzing developmentally controlled endoreplication. Egg production takes place within 16-cell germline cysts, with the asymmetric and incomplete division of a germline stem cell (Calvi and Spradling 1999). After cyst formation, nurse cells immediately exit the mitotic cycle and begin a series of 10-12 endocycles to reach 512C DNA content to provide proteins and messenger RNAs (mRNAs) for the developing oocyte. Each germline cyst is enveloped by 15-20 somatic follicle cells that divide mitotically to form an epithelial monolayer of 1000 cells and then employ three endocycles to reach 16C DNA content during stages 7-10A, the so-called "endo...