Three families of RNA viruses, the
Coronaviridae
,
Flaviviridae
, and
Filoviridae
, collectively have
great potential to cause epidemic disease in human populations. The current SARS-CoV-2
(
Coronaviridae
) responsible for the COVID-19 pandemic underscores the
lack of effective medications currently available to treat these classes of viral
pathogens. Similarly, the
Flaviviridae
, which includes such viruses as
Dengue, West Nile, and Zika, and the
Filoviridae
, with the Ebola-type
viruses, as examples, all lack effective therapeutics. In this review, we present
fundamental information concerning the biology of these three virus families, including
their genomic makeup, mode of infection of human cells, and key proteins that may offer
targeted therapies. Further, we present the natural products and their derivatives that
have documented activities to these viral and host proteins, offering hope for future
mechanism-based antiviral therapeutics. By arranging these potential protein targets and
their natural product inhibitors by target type across these three families of virus,
new insights are developed, and crossover treatment strategies are suggested. Hence,
natural products, as is the case for other therapeutic areas, continue to be a promising
source of structurally diverse new anti-RNA virus therapeutics.