Mutations that define the ctaA gene of Bacillus subtilis block cytochrome aa3 formation and sporulation. We have recently described the isolation and initial characterization of the ctaA locus. Analysis of in vivo mRNA transcripts by RNase protection experiments located the 5' and 3' termini of the ctaA transcript, confirming a monocistronic structure. By using a nuclease protection assay, an increase in the abundance of steady-state ctaA mRNA was observed during the initiation of sporulation, followed by a decrease during subsequent stages. Transcripts originating from the ctaA gene were most abundant 2.0 h after the end of exponential growth. This pattern of ctaA mRNA accumulation was confirmed by coupling the transcription of the ctaA gene to lacZ in an integrative plasmid vector. Expression of ctaA was not repressed by glucose and was independent of the spoOA and spoOH (sigH) gene products. Postexponential expression was found to be dependent on the product of the strC gene. The expression of ctaA appears to be regulated in a growth stage-specific manner. The transcriptional start site, identified by high-resolution S1 nuclease protection experiments, was preceded by a single uA-dependent promoter sequence.Bacillus subtilis responds to nutrient deprivation by undergoing a series of metabolic and morphological changes that culminate in formation of a dormant endospore (13, 14), a process that requires a normally regulated and functional system of energy metabolism (24a). Sufficient perturbation of any of these metabolic functions abolishes sporulation proficiency (24a). It is of interest to determine if changes in energy-generating processes are under the control of regulators that mediate the initiation of sporulation.Genes for biosynthesis of the electron transfer component menaquinone (menCD [20]) and for several tricarboxylic acid cycle enzymes (citB [6], citG [101, and sdh [17]) are controlled at the level of transcription. Expression of these genes increases during the transition stage from exponentialto stationary-phase growth; however, each is influenced by somewhat different metabolic conditions. Genes encoding electron transport components, tricarboxylic acid cycle enzymes, and sporulation functions may share common regulatory features, and the metabolic context in which sporulation is initiated is in part defined by components of the respiratory chain. Significant variations in the composition and organization of the B. subtilis electron transport chain are observed in response to environmental conditions (5, 9,