Correction for Vangay et al., “Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative’s Workshop and Follow-On Activities”

Vangay, Pajau; Burgin, Josephine; Johnston, Anjanette; Beck, Kristen L.; Berrios, Daniel C.; Blumberg, Kai; Canon, Shane; Chain, Patrick; Chandonia, John-Marc; Christianson, Danielle; Costes, Sylvain V.; Damerow, Joan; Duncan, William D.; Dundore‐Arias, Jose Pablo; Fagnan, Kjiersten; Galazka, Jonathan M.; Gibbons, Sean M.; Hays, D.; Hervey, W. Judson; Hu, Bin; Hurwitz, Bonnie; Jaiswal, Pankaj; Joachimiak, Marcin P.; Kinkel, Linda L.; Ladau, Joshua; Martin, Stanton; McCue, Lee Ann; Miller, Kayd; Mouncey, Nigel J.; Mungall, Chris; Pafilis, Evangelos; Reddy, T. B. K.; Richardson, Lorna; Roux, Simon; Shaffer, Justin P.; Sundaramurthi, Jagadish Chandrabose; Thompson, Luke R.; Timme, Ruth; Zheng, Jie; Wood‐Charlson, Elisha M.; Eloe‐Fadrosh, Emiley A.

doi:10.1128/msystems.00273-21

Cited by 8 publications

(2 citation statements)

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“…Transparency can also be reinforced by making sure that accepted manuscripts provide accessible, high-quality, accessioned raw data and provide metadata spreadsheets compatible with microbiome data management software (e.g., for Qiita and European Bioinformatics Institute [EBI]). Funding agencies, journals, and repositories should require and provide incentives to enforce high-quality submission standards, allow data sets to be cited, and provide better tutorials and consistent submission expectations across databases to normalize open-science practices for microbiome data (61).…”

Section: Increasing Access To Microbiome Technology and Publishingmentioning

confidence: 99%

Advancing Equity and Inclusion in Microbiome Research and Training

et al. 2021

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This article proposes ways to improve inclusion and training in microbiome science and advocates for resource expansion to improve scientific capacity across institutions and countries. Specifically, we urge mentors, collaborators, and decision-makers to commit to inclusive and accessible research and training that improves the quality of microbiome science and begins to rectify long-standing inequities imposed by wealth disparities and racism that stall scientific progress.

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Section: Increasing Access To Microbiome Technology and Publishingmentioning

confidence: 99%

Advancing Equity and Inclusion in Microbiome Research and Training

et al. 2021

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“…Core to this mission is the implementation of standardized metadata fields linked to microbiome datasets, leveraging the minimum information about any (x) sequence (MIxS) standards developed by the Genomic Standards Consortium 7 . During the initial stages of the NMDC programme, it was confirmed that the microbiome research community had varied knowledge, or were unaware, of the benefits of metadata standards as well as options for available metadata templates 8 . In order to address this knowledge gap, we set up the NMDC Ambassador Program as a community learning model.…”

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confidence: 99%