Tight junctions are the structures in mammalian epithelial cells that separate the apical and basolateral membranes and may also be important in the establishment of cell polarity. Two evolutionarily conserved multiprotein complexes, Crumbs-PALS1 (Stardust)-PATJ and Cdc42-Par6-Par3-atypical protein kinase C, have been implicated in the assembly of tight junctions and in polarization of Drosophila melanogaster epithelia. These two complexes have been linked physically and functionally by an interaction between PALS1 and Par6. Here we identify an evolutionarily conserved region in the amino terminus of PALS1 as the Par6 binding site and identify valine and aspartic acid residues in this region as essential for interacting with the PDZ domain of Par6. We have also characterized, in more detail, the amino terminus of Drosophila Stardust and demonstrate that the interaction mechanism between Stardust and Drosophila Par6 is evolutionarily conserved. Par6 interferes with PATJ in binding PALS1, and these two interactions do not appear to function synergistically. Taken together, these results define the molecular mechanisms linking two conserved polarity complexes.Epithelial cells possess asymmetry with respect to the apicobasal axis reflected by the differential distribution of proteins and lipids in the apical and basolateral surfaces (1). Polarized mammalian epithelial cells have a tight junctional seal, which serves as a physical barrier that separates apical and basolateral membranes. It has been shown that proteins containing the PDZ (postsynaptic density-95/discs large/ZO-1) domain play an important role during cell polarization (2), and multiple PDZ protein complexes are involved in the assembly and maintenance of tight junctions.One of the major groups of PDZ proteins is the membraneassociated guanylate kinase protein, which has one or more PDZ domains as well as an Src homology 3 domain and a noncatalytic guanylate kinase domain. Genetic and biochemical studies in Drosophila melanogaster have shown that membrane-associated guanylate kinase protein Stardust (Sdt) interacts with the transmembrane protein Crumbs (Crb) through its PDZ domain, and mutations in either Crb or Sdt cause polarity defects in Drosophila epithelia (3). The mammalian homologue of Sdt is PALS1 (protein associated with Lin seven) (4). Like Sdt, the PDZ domain of PALS1 binds the C-terminal tail of mammalian Crb isoforms, and PALS1 also interacts with a multi-PDZ domain protein, PATJ (PALS1-associated tight junction protein), through L27 (Lin-2 and Lin-7) domain dimerization (4, 5). The Crb-PALS1-PATJ complex localizes to the tight junctions of mammalian epithelial cells, and the disruption of the complex leads to defects in cell polarity (6). Similarly, the Drosophila PATJ homologue, formerly known as discs lost (Dlt) (7,8), can interact with the L27 domain of Sdt. Therefore, the analogous complex in D. melanogaster is Crb-Sdt-PATJ.Another evolutionarily conserved tight junction complex is composed of PDZ proteins Par3, Par6, and aPKC and the...