Controlling The Root System Architecture In Rice: Impact of Genes, Phytohormones And Root Microbiota

Abstract

BackgroundIn order to feed expanding population, new crop varieties were generated which significantly contribute to world food security. However, the growth of these improved plants varieties relied primarily on synthetic fertilizers, which negatively affect the environment as well as human health. Plants adapt to adverse environmental changes by adopting root systems through architectural changes at the root-type and tissue-specific changes and nutrient uptake efficiency. ScopePlants adapt and operate distinct pathways at various stages of development in order to optimally establish their root systems, such as change in the expression profile of genes, changes in phytohormone level and microbiome induced Root System Architecture (RSA) modification. Many scientific studies have been carried out to understand plant response to microbial colonization and how microbes involved in RSA improvement through phytohormone level and transcriptomic changes.ConclusionIn this review, we spotlight the impact of genes, phytohormones and root microbiota on RSA and provide specific, critical new insights that have been resulted from recent studies on rice root as a model. First, we discuss new insights into the genetic regulation of RSA. Next, hormonal regulation of root architecture and the impact of phytohormones in crown root and root branching is discussed. Finally, we discussed the impact of root microbiota in RSA modification and summarized the current knowledge about the biochemical and central molecular mechanisms involved.