Abstract:Serotonin transporter (SERT) is responsible for reuptake and recycling of 5-hydroxytryptamine (5-HT; serotonin) after its exocytotic release during neurotransmission. Mutations in human SERT are associated with psychiatric disorders and autism. Some of these mutations affect the regulation of SERT activity by cGMPdependent phosphorylation. Here we provide direct evidence that this phosphorylation occurs at Thr276, predicted to lie near the cytoplasmic end of transmembrane helix 5 (TM5). Using membranes from He… Show more
“…Computational modeling predicts that the conformational equilibrium of DAT is shifted towards occluded-intermediate (OC) and IF states in the presence of substrates ( Cheng and Bahar, 2015 ). This prediction is supported by the experimental evidence in studies of SERT ( Zhang et al, 2016 ). We found that oligomerization and endocytosis of DAT in AIM-100-treated cells were significantly decreased by saturating concentrations (20–100 µM) of DAT substrates, dopamine (DA) and amphetamine (Amph) ( Figure 6 ).…”
Clathrin-independent endocytosis (CIE) mediates internalization of many transmembrane proteins but the mechanisms of cargo recruitment during CIE are poorly understood. We found that the cell-permeable furopyrimidine AIM-100 promotes dramatic oligomerization, clustering and CIE of human and mouse dopamine transporters (DAT), but not of their close homologues, norepinephrine and serotonin transporters. All effects of AIM-100 on DAT and the occupancy of substrate binding sites in the transporter were mutually exclusive, suggesting that AIM-100 may act by binding to DAT. Surprisingly, AIM-100-induced DAT endocytosis was independent of dynamin, cholesterol-rich microdomains and actin cytoskeleton, implying that a novel endocytic mechanism is involved. AIM-100 stimulated trafficking of internalized DAT was also unusual: DAT accumulated in early endosomes without significant recycling or degradation. We propose that AIM-100 augments DAT oligomerization through an allosteric mechanism associated with the DAT conformational state, and that oligomerization-triggered clustering leads to a coat-independent endocytosis and subsequent endosomal retention of DAT.
“…Computational modeling predicts that the conformational equilibrium of DAT is shifted towards occluded-intermediate (OC) and IF states in the presence of substrates ( Cheng and Bahar, 2015 ). This prediction is supported by the experimental evidence in studies of SERT ( Zhang et al, 2016 ). We found that oligomerization and endocytosis of DAT in AIM-100-treated cells were significantly decreased by saturating concentrations (20–100 µM) of DAT substrates, dopamine (DA) and amphetamine (Amph) ( Figure 6 ).…”
Clathrin-independent endocytosis (CIE) mediates internalization of many transmembrane proteins but the mechanisms of cargo recruitment during CIE are poorly understood. We found that the cell-permeable furopyrimidine AIM-100 promotes dramatic oligomerization, clustering and CIE of human and mouse dopamine transporters (DAT), but not of their close homologues, norepinephrine and serotonin transporters. All effects of AIM-100 on DAT and the occupancy of substrate binding sites in the transporter were mutually exclusive, suggesting that AIM-100 may act by binding to DAT. Surprisingly, AIM-100-induced DAT endocytosis was independent of dynamin, cholesterol-rich microdomains and actin cytoskeleton, implying that a novel endocytic mechanism is involved. AIM-100 stimulated trafficking of internalized DAT was also unusual: DAT accumulated in early endosomes without significant recycling or degradation. We propose that AIM-100 augments DAT oligomerization through an allosteric mechanism associated with the DAT conformational state, and that oligomerization-triggered clustering leads to a coat-independent endocytosis and subsequent endosomal retention of DAT.
“…To facilitate 5HT reuptake, the transporter needs to undergo distinct conformational changes. In principle, these changes expose the substrate binding site(s) to one side of the membrane at a time, according to the so-called alternatingaccess mechanism [9], support for which has been provided by structural modeling and biochemical experiments [10][11][12], and recently also by X-ray and cryo-EM crystallography [13][14][15]. Taken together, the hSERT transport cycle can be represented roughly as shown in Fig 1, albeit with the caveat that several important details remain elusive.…”
The human serotonin transporter hSERT facilitates the reuptake of its endogenous substrate serotonin from the synaptic cleft into presynaptic neurons after signaling. Reuptake regulates the availability of this neurotransmitter and therefore hSERT plays an important role in balancing human mood conditions. In 2016, the first 3D structures of this membrane transporter were reported in an inhibitor-bound, outward-open conformation. These structures revealed valuable information about interactions of hSERT with antidepressant drugs. Nevertheless, the question remains how serotonin facilitates the specific conformational changes that open and close pathways from the synapse and to the cytoplasm as required for transport. Here, we present a serotonin-bound homology model of hSERT in an outward-occluded state, a key intermediate in the physiological cycle, in which the interactions with the substrate are likely to be optimal. Our approach uses two template structures and includes careful refinement and comprehensive computational validation. According to microsecond-long molecular dynamics simulations, this model exhibits interactions between the gating residues in the extracellular pathway, and these interactions differ from those in an outward-open conformation of hSERT bound to serotonin.Moreover, we predict several features of this state by monitoring the intracellular gating residues, the extent of hydration, and, most importantly, protein-ligand interactions in the central binding site. The results illustrate common and distinct characteristics of these two transporter states and provide a starting point for future investigations of the transport mechanism in hSERT.
“…In contrast, serotonin, in the presence of its symported ions Na ϩ and Cl Ϫ , enhanced accessibility at these positions, consistent with this region contributing to the substrate permeation pathway. Notably, there is strong evidence for regulation of SERT function through phosphorylation of Thr-276 (30), which aligns with Gly-171 in MhsT, adjacent to unwound Arg-174 -Met-180 in MhsT U . In the outward-facing SERT structure, this residue is located on the back side of the helical TM5i-IL2 region with its side chain forming an H-bond with the backbone of Ser-269 (13), in a position and orientation that would seem rather inaccessible to kinases.…”
Section: The Role Of Tm5 In Na2 Release and Inward Openingmentioning
Neurotransmitter:sodium symporters (NSSs) terminate neurotransmission by the reuptake of released neurotransmitters. This active accumulation of substrate against its concentration gradient is driven by the transmembrane Na gradient and requires that the transporter traverses several conformational states. LeuT, a prokaryotic NSS homolog, has been crystallized in outward-open, outward-occluded, and inward-open states. Two crystal structures of another prokaryotic NSS homolog, the multihydrophobic amino acid transporter (MhsT) from , have been resolved in novel inward-occluded states, with the extracellular vestibule closed and the intracellular portion of transmembrane segment 5 (TM5i) in either an unwound or a helical conformation. We have investigated the potential involvement of TM5i in binding and unbinding of Na2, the Na bound in the Na2 site, by carrying out comparative molecular dynamics simulations of the models derived from the two MhsT structures. We find that the helical TM5i conformation is associated with a higher propensity for Na2 release, which leads to the repositioning of the N terminus and transition to an inward-open state. By using comparative interaction network analysis, we also identify allosteric pathways connecting TM5i and the Na2 binding site to the extracellular and intracellular regions. Based on our combined computational and mutagenesis studies of MhsT and LeuT, we propose that TM5i plays a key role in Na2 binding and release associated with the conformational transition toward the inward-open state, a role that is likely to be shared across the NSS family.
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