2021
DOI: 10.1038/s41598-021-94707-2
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Conformational dynamics of androgen receptors bound to agonists and antagonists

Abstract: The androgen receptor (AR) is critical in the progression of prostate cancer (PCa). Small molecule antagonists that bind to the ligand binding domain (LBD) of the AR have been successful in treating PCa. However, the structural basis by which the AR antagonists manifest their therapeutic efficacy remains unclear, due to the lack of detailed structural information of the AR bound to the antagonists. We have performed accelerated molecular dynamics (aMD) simulations of LBDs bound to a set of ligands including a … Show more

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Cited by 17 publications
(17 citation statements)
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“…Conformational changes of the H11-H12 loop region have also been observed in molecular-dynamics simulations with second-generation antagonists (Balbas et al, 2013;Gim et al, 2021;Kocak & Yildiz, 2022). In the docked poses, part of enzalutamide can be positioned near the Phe877 side chain and the H11-H12 loop region, suggesting that the conformation of this region could affect ligand binding.…”
Section: A Partially Open Conformation Of Ar Lbd With Resistance Muta...mentioning
confidence: 70%
“…Conformational changes of the H11-H12 loop region have also been observed in molecular-dynamics simulations with second-generation antagonists (Balbas et al, 2013;Gim et al, 2021;Kocak & Yildiz, 2022). In the docked poses, part of enzalutamide can be positioned near the Phe877 side chain and the H11-H12 loop region, suggesting that the conformation of this region could affect ligand binding.…”
Section: A Partially Open Conformation Of Ar Lbd With Resistance Muta...mentioning
confidence: 70%
“…although the precise explanation for different effects between bicalutamide and enzalutamide/apalutamide in STeaP1 expression is unclear, the differences observed might be due to different affinities of these drugs to ar. in fact, it the conformational dynamics of ar with bicalutamide, enzalutamide and apalutamide was evaluated and it was shown that enzalutamide and apalutamide induce different conformational changes in ar compared with bicalutamide (58). in addition, point mutations in ar, namely F877l and T878a, are associated with resistance to enzalutamide and apalutamide, but not to bicalutamide (59)(60)(61).…”
Section: Discussionmentioning
confidence: 99%
“…FDA approved second-generation AR antagonists Enzalutamide (also named MDV3100) is the first FDA-approved second-generation AR antagonist for the treatment of CRPC and exhibits a much higher AR-binding affinity in comparison to the first-generation AR antagonists. It competitively binds to the ligand-binding domain (LBD) of AR and inhibits androgen binding, nuclear translocation, DNA binding, and co-activator recruitment [26,27]. Enzalutamide significantly prolongs the overall survival and metastatic-free survival of CRPC patients [17,28,29], and was approved by the United States FDA for treatment of metastatic CRPC (mCRPC) and non-metastatic CRPC (nmCRPC) in 2012 and 2018, respectively.…”
Section: Development Of Second-generation Ar Antagonistsmentioning
confidence: 99%