2008
DOI: 10.1016/j.jmb.2007.10.017
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Complex of a Protective Antibody with Its Ebola Virus GP Peptide Epitope: Unusual Features of a Vλx Light Chain

Abstract: Abstract13F6-1-2 is a murine monoclonal antibody that recognizes the heavily glycosylated mucin-like domain of the Ebola virus virion-attached glycoprotein (GP) and protects animals against lethal viral challenge. Here we present the crystal structure, at 2.0 Å, of 13F6-1-2 in complex with its Ebola virus GP peptide epitope. The GP peptide binds in an extended conformation, anchored primarily by interactions to the heavy chain. Two GP residues, Gln P406 and Arg P409, make extensive side chain hydrogen bond and… Show more

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Cited by 52 publications
(39 citation statements)
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References 45 publications
(9 reference statements)
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“…Alternatively, non-Fc amino acids may have a conformational affect on the Fc region. h-13F6 contains a rare Vλx light-chain variable region and the crystal structure for the murine parental mAb shows that the three light-chain complementarity-determining regions adopt unusual conformations distinct from Vκ and other Vλ light chains (19). Also noteworthy is the relatively high affinity of h-13F6 agly for FcγRIII.…”
Section: Discussionmentioning
confidence: 99%
“…Alternatively, non-Fc amino acids may have a conformational affect on the Fc region. h-13F6 contains a rare Vλx light-chain variable region and the crystal structure for the murine parental mAb shows that the three light-chain complementarity-determining regions adopt unusual conformations distinct from Vκ and other Vλ light chains (19). Also noteworthy is the relatively high affinity of h-13F6 agly for FcγRIII.…”
Section: Discussionmentioning
confidence: 99%
“…Thus, even though we have structural information on the lower core of GP, there is no structural information on the mucin-like domain, save one structure of an antibody bound to a separate mucin-like domain linear epitopes. This crystal structure, of MAb 13F6-1-2, a representative member of competition group I, in complex with its peptide linear epitope (GP residues 401 to 417), has provided insight into its unique structural mechanism of neutralization (23). 13F6-1-2 contains an extremely rare Vx light chain that is represented by only 0.5% of mouse antibody sequences.…”
mentioning
confidence: 99%
“…13F6-1-2 contains an extremely rare Vx light chain that is represented by only 0.5% of mouse antibody sequences. The use of this very rare light chain confers noncanonical structures to all three CDRs and may consequently result in the unusual mode of binding of the antibody (23). The GP 401-417 peptide, representing the epitope of 13F6-1-2, adopts a linear, extended conformation and binds into a shallow groove in the 13F6-1-2 combining site that extends diagonally across the antibody combining site.…”
mentioning
confidence: 99%
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“…To visualize potential roles of Vλx junctional diversity in Ag binding, we compared the structures of three Abs using Vλx that have been determined by X-ray diffraction (17,28,29). In each case, the structure of the unbound Abs and of the Ab-Ag complexes could be examined.…”
Section: Resultsmentioning
confidence: 99%