“…Several studies (Table 2) involving the use of NGS for genome sequencing (complete or partial), detection, and characterization of RNA viruses infecting potato (S. tuberosum and S. phureja) (Gutiérrez-Sánchez et al, 2014;Villamil-Garzón et al, 2014;Muñoz et al, 2016;Vallejo C et al, 2016), peanut (Gutiérrez Sánchez et al, 2016), rice (Jimenez et al, 2018), cassava (Carvajal-Yepes et al, 2014), exotic fruits, such as Solanum quitoense (Gallo et al, 2018), Solanum betaceum , Physalis peruviana (Gutiérrez et al, 2015), Passiflora edulis (Jaramillo Mesa et al, 2018;Jaramillo Mesa et al, 2019), and horticultural products (Gutiérrez et al, 2017;Muñoz Baena et al, 2017) have been included. The above studies have been conducted using mainly total RNA isolated from symptomatic virus infected plants followed by depletion of rRNA and whole RNA sequencing.…”