Complete chloroplast genome sequence of <i>Artemisia fukudo</i> Makino (Asteraceae)

Lee, Yun Sun; Park, Jee Young; Kim, Jin‐Kyung; Lee, Hyun Oh; Park, Hyun-Seung; Lee, Sang-Choon; Kang, Jae-Mo; Lee, Taek Joo; Sung, Sang Hyun; Yang, Tae-Jin

doi:10.1080/23802359.2016.1155426

Cited by 12 publications

(14 citation statements)

References 9 publications

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“…Among them, LSC and the 72 shared-protein-sequences tree showed the most similar topological structures and were consistent with the phylogeny of 21 Korean Artemisia species reconstructed by trnL _ trnF markers [27]. However, although some Artemisia cp data have been published, other studies contained only one to four Artemisia species [22–26], and it is difficult to obtain more phylogenetic data to support our results.…”

Section: Discussionsupporting

confidence: 84%

Detecting useful genetic markers and reconstructing the phylogeny of an important medicinal resource plant, Artemisia selengensis, based on chloroplast genomics

et al. 2019

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Artemisia selengenesis is not only a health food, but also a well-known traditional Chinese medicine. Only a fraction of the chloroplast (cp) genome data of Artemisia has been reported and chloroplast genomic materials have been widely used in genomic evolution studies, molecular marker development, and phylogenetic analysis of the genus Artemisia, which makes evolutionary studies, genetic improvement, and phylogenetic identification very difficult. In this study, the complete chloroplast genome of A. selengensis was compared with that of other species within Artemisia and phylogenetic analyses was conducted with other genera in the Asteraceae family. The results showed that A. selengensis is an AT-rich species and has a typical quadripartite structure that is 151,215 bp in length. Comparative genome analyses demonstrated that the available chloroplast genomes of species of Artemisia were well conserved in terms of genomic length, GC contents, and gene organization and order. However, some differences, which may indicate evolutionary events, were found, such as a re-inversion event within the Artemisia genus, an unequal duplicate phenomenon of the ycf1 gene because of the expansion and contraction of the IR region, and the fast-evolving regions. Repeated sequences analysis showed that Artemisia chloroplast genomes presented a highly similar pattern of SSR or LDR distribution. A total of 257 SSRs and 42 LDRs were identified in the A. selengensis chloroplast genome. The phylogenetic analysis showed that A. selengensis was sister to A. gmelinii. The findings of this study will be valuable in further studies to understand the genetic diversity and evolutionary history of Asteraceae.

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Section: Discussionsupporting

confidence: 84%

Detecting useful genetic markers and reconstructing the phylogeny of an important medicinal resource plant, Artemisia selengensis, based on chloroplast genomics

et al. 2019

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“…Previous studies have reported that A. gmelinii and A. capillaris contain useful metabolites with various pharmacological effects such as anti-infective and anti-oxidant activity and hepatoprotective and antifibrotic effects (K€ oncz€ ol et al 2012;Wang et al 2012). However, to date, genetic and genome research related to barcoding system lack in Artemisia genus, despite the importance of herbal medicine authentication system is increased (Liu et al 2013;Lee et al 2016). In this study, we Figure 1.…”

Section: Main Textmentioning

confidence: 74%

“…The highquality paired end sequences of 2.1 and 1.6 Gb were generated from A. gmelinii and A. capillaris, respectively, and separately assembled using CLC genome assembler (v. beta 4.6, CLC Inc., Lyngby, Denmark). Afterwards, contigs representing chloroplast sequence were retrieved, ordered and combined into a single draft sequence by comparing chloroplast genomes of A. frigida (JX293720, Liu et al 2013) and A. fukudo (KU360270, Lee et al 2016). The complete genome of A. gmelinii and A. capillaris were deposited in GenBank (A. gmelinii: KU736962 and A. capillaris: KU736963).…”

Section: Main Textmentioning

confidence: 99%

The complete chloroplast genome sequences of Artemisia gmelinii andArtemisia capillaris (Asteraceae)

Lee

Park

Kim

et al. 2016

Mitochondrial DNA Part B

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“…It also has various biological effects, including anti-inflammatory, antitumor, and antibacterial properties. 40 Artemisia gmelinii Weber ex Stechm. is a plant of the high-altitude regions of Asia.…”

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confidence: 99%

Bioactive Compounds and Health Benefits ofArtemisiaSpecies

Nigam

Atanassova²,

Mishra

et al. 2019

Natural Product Communications

138

125

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Artemisia L. is a genus of small herbs and shrubs found in northern temperate regions. It belongs to the important family Asteraceae, one of the most numerous plant groupings, which comprises about 1000 genera and over 20000 species. Artemisia has a broad spectrum of bioactivity, owing to the presence of several active ingredients or secondary metabolites, which work through various modes of action. It has widespread pharmacological activities and has been used as traditional medicine since ancient times as an anthelmintic, antispasmodic, antirheumatic, and antibacterial agent and for the treatment of malaria, hepatitis, cancer, inflammation, and menstrual-related disorders. This review comprises the updated information about the ethnomedical uses and health benefits of various Artemisia spp. and general information about bioactive compounds and free radicals.

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Complete chloroplast genome sequence of Artemisia fukudo Makino (Asteraceae)

Cited by 12 publications

References 9 publications

Detecting useful genetic markers and reconstructing the phylogeny of an important medicinal resource plant, Artemisia selengensis, based on chloroplast genomics

Detecting useful genetic markers and reconstructing the phylogeny of an important medicinal resource plant, Artemisia selengensis, based on chloroplast genomics

The complete chloroplast genome sequences of Artemisia gmelinii andArtemisia capillaris (Asteraceae)

Bioactive Compounds and Health Benefits ofArtemisiaSpecies

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