We present a general model based on a time‐dependent, reaction–diffusion equation to determine the dosing times and coverage profiles in structured substrates during atomic layer deposition (ALD). We first derive expressions comprising a non‐linear diffusion–reaction equation coupled to a surface kinetic equation. In their non‐dimensional forms, these equations show that coverage dynamics during ALD in nanostructured substrates depend only on two non‐dimensional parameters, the Damkoler and precursor excess (number of molecules per surface site in the nanostructure) numbers. Using the assumptions of molecular flow in a circular pore, we derive a general, analytic equation to predict saturation exposure times. To demonstrate the utility of our model, we derive additional expressions incorporating a precursor loss term relevant to predicting exposure times during ozone‐based ALD. Because our model makes no assumptions about the diffusion coefficient or sample geometry, it can easily be adapted to describe a broad range of ALD systems such as trenches and vias, anodized alumina, or aerogels under almost any conditions including molecular, viscous, and transition flow regimes