Large rivers are difficult to sample due to their size yet critical to
monitor because humans heavily rely upon and alter them. Aquatic
invertebrates are commonly used to assess the ecosystem quality of
streams, but methods to sample these animals in large rivers are still
being developed. We sampled aquatic invertebrates using two methods in
the Snake River near Jackson, Wyoming. We used a Hess sampler to collect
aquatic invertebrates in areas of the river that were <42 cm
in depth and rock baskets in deeper areas that were near the bank. Hess
samples collected more aquatic invertebrate taxa, and a higher
proportion of Ephemeroptera, Plecoptera and burrowing taxa. Rock baskets
collected a higher proportion of Trichoptera, filterers and clinging
taxa. Bioassessment metrics differed between sampling methods; richness,
diversity, evenness, Ephemeroptera, Plecoptera and Trichoptera (EPT) and
Hilsenhoff’s biotic index produced higher values in Hess samples, and
percent EPT was higher in rock baskets. Non-metric multidimensional
scaling and analysis of similarity indicated that the samplers collected
different assemblages (p < 0.001). The standard error of total
invertebrate density was smaller when at least seven samples were
collected and most species were collected when 6-7 replicate samples
were processed within a reach. Understanding how sampling method alters
the aquatic invertebrates collected will help managers develop
monitoring protocols that are best suited to the river and collect the
most unbiased invertebrate assemblages.