Comparative sub-cellular proteome analyses reveals metabolic differentiation and production of effector-like molecules in the dieback phytopathogen Phytophthora cinnamomi.

Andronis, Christina E.; Jacques, Silke; Lipscombe, Richard; Tan, Kar‐Chun

doi:10.1016/j.jprot.2022.104725

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2024

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“…In total, 713 effectors were predicted for P. citrophthora STE-U-9442, of which 420 is cytoplasmic and 293 is apoplastic (File S2). Oomycete pathogens, such as Phytophthora , secrete a large array of effector proteins to manipulate host immunity and facilitate infection 29 , 30 . Of the total 16,409 protein-coding genes in the genome, 1,157 were predicted to be pathogenicity related ( Table S2 ).…”

Section: Resultsmentioning

confidence: 99%

Reference Genome Resource for the Citrus Pathogen Phytophthora citrophthora

Möller,

Coetzee,

van Niekerk

et al. 2024

J. Genomics

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Phytophthora citrophthora is an oomycete pathogen that infects citrus. Its occurrence in citrus-growing regions worldwide is considered a major contributor to crop losses. This study presents a high-quality genome resource for P. citrophthora , which was generated using PacBio HiFi long-read high-throughput sequencing technology. We successfully assembled a 48.5 Mb genome containing 16,409 protein-coding genes from high-quality reads. This marks the first complete genome assembly of P. citrophthora , providing a valuable resource to enhance the understanding of pathogenic behaviour and fungicide sensitivity of this destructive citrus pathogen.

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Section: Resultsmentioning

confidence: 99%