2007
DOI: 10.1186/1471-2164-8-124
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Comparative sequence analysis of leucine-rich repeats (LRRs) within vertebrate toll-like receptors

Abstract:

Abstract

Background

Toll-like receptors (TLRs) play a central role in innate immunity. TLRs are membrane glycoproteins and contain leucine rich repeat (LRR) motif in the ectodomain. TLRs recognize and respond to molecules such as lipopolysaccharide, peptidoglycan, flagellin, and RNA from bacteria or viruses. The LRR domains in TLRs have been inferred to be responsible for molecular recognition. All LRRs include the highly conserved segment, LxxLxLxxNxL, in which "L" is Leu, Ile, Val, or Phe an… Show more

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Cited by 353 publications
(278 citation statements)
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References 78 publications
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“…Although LRR structures with deviations from the canonical structure have been reported [5,6,11,12], the continuous packing of the LRRs in these structures still results in the formation of a single solenoid. Our study shows a unique LRR structure containing two LRR domains, providing experimental evidence for a previous prediction that a non-LRR region-containing LRR protein can contain two solenoids [7]. The unexpected finding that the non-LRR region of TMK1 resembles the LRRNT of BRI1 is consistent with the model in which the family of non-LRR region-containing LRR proteins underwent duplication and fusion during evolution [4].…”
Section: Dear Editorsupporting
confidence: 76%
See 1 more Smart Citation
“…Although LRR structures with deviations from the canonical structure have been reported [5,6,11,12], the continuous packing of the LRRs in these structures still results in the formation of a single solenoid. Our study shows a unique LRR structure containing two LRR domains, providing experimental evidence for a previous prediction that a non-LRR region-containing LRR protein can contain two solenoids [7]. The unexpected finding that the non-LRR region of TMK1 resembles the LRRNT of BRI1 is consistent with the model in which the family of non-LRR region-containing LRR proteins underwent duplication and fusion during evolution [4].…”
Section: Dear Editorsupporting
confidence: 76%
“…Despite that its superhelical structure is markedly different from those of the typical LRR proteins, the interrupted LRRs in BRI1 still pack continuously, forming a single solenoid structure as observed in all the other known LRR structures. However, atypical LRRs like TLR7-9 have been predicted to form two solenoids [7], although experimental evidence for this is lacking. Here, we describe the crystal structure of the LRR domain of TMK1 (receptor-like TransMembrane Kinase 1) [8], an atypical LRR protein from Arabidopsis that contains two solenoids and discuss its biological implications.…”
Section: Dear Editormentioning
confidence: 99%
“…Lipopolysaccharides and lipoteichoic acids are such structures, but also surface proteins display repeated molecular patterns that can be widely dispersed among bacteria. Lrr motifs are currently found in more than 6000 proteins of eukaryotic and prokaryotic organisms (37). According to the length and consensus sequence of the repeats, seven subgroups of Lrr proteins have been identified (35).…”
Section: Discussionmentioning
confidence: 99%
“…Further, the standard statistical tests of neutrality (e.g., Tajima's D) are applicable to sequence data, and not to genotype data on a set of preascertained SNPs. In particular, we sought to test whether overdominant selection operates on the TLR genes, because TLR proteins contain leucine rich repeat (LRR) domains (characterized by a segment LxxLxLxxNxL, in which ''L'' is Leu, Ile, Val, or Phe and ''N'' is Asn, Thr, Ser, or Cys and ''x'' is any amino acid) that are responsible for molecular recognition (22). Similar to the antigen recognition site of the MHC locus, individuals who are heterozygous at the variant sites in these LRR coding regions may be capable of expressing various types of microbial recognition peptides and will therefore be expected to enjoy a selective advantage in a population exposed to a diverse array of microbial pathogens.…”
mentioning
confidence: 99%