“…In cases where more than one protein was indicated with a significant score for the MS/MS-derived peptide sequence, the match was considered in terms of the highest ranked hit, molecular mass matches, and emPAI, an approach that has been routinely used for proteomics studies (Perkins et al, 1999;Poetsch and Wolters, 2008;Yoon et al, 2009). The details of the MS/MS analyses, including the protein identification, score of the identified protein, threshold score, number of matched peptides, percentage of sequence coverage, Sol Genomics Network (SGN) database accession number, theoretical and experimental M r , and pI values for each protein, peptide sequence, and corresponding peptide score are provided in Supplemental Table S4.…”