Comparative mitochondrial genomic analysis provides new insights into the evolution of the subfamily Lamiinae (Coleoptera: Cerambycidae)

Shi, Fengming; Yu, Tao; Xu, Yecheng; Zhang, Sainan; Niu, Yiming; Ge, Si-Xun; Tao, Jing; Zong, Shixiang

doi:10.1016/j.ijbiomac.2022.11.125

Cited by 7 publications

(10 citation statements)

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“…Souza et al [17] first conducted a relatively intensive phylogenetic evaluation of Lamiinae, followed by Ashman et al [18] and Shi et al [10], who subsequently published two analyses of Lamiiniae. In the Lamiiniae, the monophyly of Batocerini, Mesosini, and Ceroplesini is definite, but controversies remain.…”

Section: Tribal Classification In Lamiinaementioning

confidence: 99%

“…Ashman et al [18] believed that the Saperdini are monophyletic, whereas the Acanthocinini, Apomecynini, and Pteropliini are paraphyletic. However, Shi et al [10] believed that Acanthocinini, Agapanthiini, Dorcaschematini, Pteropliini, and Saperdini are monophyletic, whereas the monophyly of Lamiini is unstable. Our study is similar to the results of Souza et al [17] and Ashman et al [18] but differs from the data acquired by Shi et al [10].…”

Section: Tribal Classification In Lamiinaementioning

confidence: 99%

“…However, Shi et al [10] believed that Acanthocinini, Agapanthiini, Dorcaschematini, Pteropliini, and Saperdini are monophyletic, whereas the monophyly of Lamiini is unstable. Our study is similar to the results of Souza et al [17] and Ashman et al [18] but differs from the data acquired by Shi et al [10]. Overall, we prefer the results of Souza et al [17] and Ashman et al [18].…”

Section: Tribal Classification In Lamiinaementioning

confidence: 99%

“…To date, eighty complete or partial mitochondrial genomes of Lamiinae (≥13,854 bp) have already been published in the NCBI [10,11,[35][36][37][38][39][40][41][42][43][44][45][46][47][48][49][50]. The position of the Lamiinae subfamily has been clearly delineated, but the relationships of Lamiinae tribes remain vague [17,51].…”

Section: Introductionmentioning

confidence: 99%

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The Phylogenetic Relationship of Lamiinae (Coleoptera: Cerambycidae) Using Mitochondrial Genomes

Li,

Yu,

et al. 2023

Genes

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Lamiinae is the largest subfamily of the Cerambycidae (longhorn beetles), with approximately 21,863 described species. Previous phylogenetic studies of Lamiinae showed that this subfamily was monophyletic, but the relationship between the tribes of Lamiinae is still controversial. Partial molecular data and species morphological characteristics are not sufficient to resolve species phylogenetic studies perfectly. At the same time, the full mitochondrial genome contains more comprehensive genetic data. Benefiting from the development of next-generation sequencing (NGS), mitochondrial genomes can be easily acquired and used as reliable molecular markers to investigate phylogenetic relationships within Cerambycidae. Using NGS technology, we obtained 11 mitochondrial genome sequences of Lamiinae species. Based on this newly generated mitochondrial genome dataset matrix, we reconstructed the phylogeny of Lamiinae. The Bayesian Inference and Maximum Likelihood analyses strongly support the monophyly of four tribes (Lamiini, Batocerini, Mesosini, and Saperdini), whereas the tribe Acanthocinini was identified as paraphyletic. Other mitochondrial structural features were also observed: the start codon in the nad1 gene of all 11 mitochondrial genomes is TTG; 17–22 bp intergenic spacers (IGS) with a ‘TACTA’ motif were found between trnS2 and nad1. Moreover, two long IGS were found in Mesosa myops and Batocera sp. Tandem repeats were found in the IGS of Batocera sp.

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Section: Tribal Classification In Lamiinaementioning

confidence: 99%

Section: Tribal Classification In Lamiinaementioning

confidence: 99%

Section: Tribal Classification In Lamiinaementioning

confidence: 99%

Section: Introductionmentioning

confidence: 99%

See 2 more Smart Citations

The Phylogenetic Relationship of Lamiinae (Coleoptera: Cerambycidae) Using Mitochondrial Genomes

Li,

Yu,

et al. 2023

Genes

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“…The pine wood nematode (PWN, Bursaphelenchus xylophilus ) is an obligate endoparasitic nematode of Pinaceae species that causes pine wilt disease (PWD), which is native to North America and causes severe damage to pine trees, inducing substantial economic and ecological losses ( Zhang et al, 2022 ; Shi et al, 2023 ). PWD was first discovered in 1982 at Purple Mountain in Nanjing, China.…”

Section: Introductionmentioning

confidence: 99%

Transcriptome analysis highlights the influence of temperature on hydrolase and traps in nematode-trapping fungi

Jia,

Xia,

Zhang

et al. 2024

Front. Microbiol.

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Pine wilt disease caused by Bursaphelenchus xylophilus poses a serious threat to the economic and ecological value of forestry. Nematode trapping fungi trap and kill nematodes using specialized trapping devices, which are highly efficient and non-toxic to the environment, and are very promising for use as biological control agents. In this study, we isolated several nematode-trapping fungi from various regions and screened three for their high nematocidal efficiency. However, the effectiveness of these fungi as nematicides is notably influenced by temperature and exhibits different morphologies in response to temperature fluctuations, which are categorized as “NA,” “thin,” “dense,” and “sparse.” The trend of trap formation with temperature was consistent with the trend of nematocidal efficiency with temperature. Both of which initially increased and then decreased with increasing temperature. Among them, Arthrobotrys cladodes exhibited the highest level of nematocidal activity and trap formation among the tested species. Transcriptome data were collected from A. cladodes with various trap morphologies. Hydrolase activity was significantly enriched according to GO and KEGG enrichment analyses. Eight genes related to hydrolases were found to be consistent with the trend of trap morphology with temperature. Weighted gene co-expression analysis and the Cytoscape network revealed that these 8 genes are associated with either mitosis or autophagy. This suggests that they contribute to the formation of “dense” structures in nematode-trapping fungi. One of these genes is the serine protein hydrolase gene involved in autophagy. This study reveals a potentially critical role for hydrolases in trap formation and nematocidal efficiency. And presents a model where temperature affects trap formation and nematocidal efficiency by influencing the serine protease prb1 involved in the autophagy process.

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Unveiling winter survival strategies: physiological and metabolic responses to cold stress of Monochamus saltuarius larvae during overwintering

Shi,

Xing,

Niu

et al. 2024

Pest Management Science

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BACKGROUNDMonochamus saltuarius is a destructive trunk‐borer of pine forest and an effective dispersal vector for pinewood nematode (PWN), a causative agent of pine wilt disease (PWD), which leads to major ecological disasters. Cold winter temperatures determine insect survival and distribution. However, little is known about the cold tolerance and potential physiological mechanisms of M. saltuarius.RESULTSWe demonstrated that dead Pinus koraiensis trunks do not provide larvae with insulation. The M. saltuarius larvae are freeze‐tolerant species. Unlike most other freeze‐tolerant insects, they can actively freeze extracellular fluid at higher subzero temperatures by increasing their supercooling points. The main energy sources for larvae overwintering are glycogen and the mid‐late switch to lipid. The water balance showed a decrease in free and an increase in bound water of small magnitude. Cold stress promoted lipid peroxidation, thus activating the antioxidant system to prevent cold‐induced oxidative damage. We found eight main pathways linked to cold stress and 39 important metabolites, ten of which are cryoprotectants, including maltose, UDP‐glucose, d‐fructose 6P, galactinol, dulcitol, inositol, sorbitol, l‐methionine, sarcosine, and d‐proline. The M. saltuarius larvae engage in a dual respiration process involving both anaerobic and aerobic pathways when their bodily fluids freeze. Cysteine and methionine metabolism, as well as alanine, aspartate, and glutamate metabolism, are the most important pathways linked to antioxidation and energy production.CONCLUSIONSThe implications of our findings may help strengthen and supplement the management strategies for monitoring, quarantine, and control of this pest, thereby contributing to controlling the further spread of PWD. © 2024 Society of Chemical Industry.

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Comparative mitochondrial genomic analysis provides new insights into the evolution of the subfamily Lamiinae (Coleoptera: Cerambycidae)

Cited by 7 publications

References 70 publications

The Phylogenetic Relationship of Lamiinae (Coleoptera: Cerambycidae) Using Mitochondrial Genomes

The Phylogenetic Relationship of Lamiinae (Coleoptera: Cerambycidae) Using Mitochondrial Genomes

Transcriptome analysis highlights the influence of temperature on hydrolase and traps in nematode-trapping fungi

Unveiling winter survival strategies: physiological and metabolic responses to cold stress of Monochamus saltuarius larvae during overwintering

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