2020
DOI: 10.3390/ijms21113758
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Comparative Analyses of Five Complete Chloroplast Genomes from the Genus Pterocarpus (Fabacaeae)

Abstract: Pterocarpus is a genus of trees mainly distributed in tropical Asia, Africa, and South America. Some species of Pterocarpus are rosewood tree species, having important economic value for timber, and for some species, medicinal value as well. Up to now, information about this genus with regard to the genomic characteristics of the chloroplasts has been limited. Based on a combination of next-generation sequencing (Illumina Hiseq) and long-read sequencing (PacBio), the whole chloroplast genomes (cp genomes) of f… Show more

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Cited by 65 publications
(78 citation statements)
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“…Contrary to Hong et al. (2020) results in chloroplast genomes of five Pterocarpus species, among the single sequence repeats identified there was no single‐nucleotide repeats motifs accounted. The observed proportion of dinucleotide, trinucleotide, and tetranucleotide were respectively 30.1%, 25.3%, and 24.3%, while the tetranucleotide proportion was 2.27%.…”
Section: Resultscontrasting
confidence: 93%
See 1 more Smart Citation
“…Contrary to Hong et al. (2020) results in chloroplast genomes of five Pterocarpus species, among the single sequence repeats identified there was no single‐nucleotide repeats motifs accounted. The observed proportion of dinucleotide, trinucleotide, and tetranucleotide were respectively 30.1%, 25.3%, and 24.3%, while the tetranucleotide proportion was 2.27%.…”
Section: Resultscontrasting
confidence: 93%
“…More recently, in order to facilitate population identification and biodiversity protection, Hong et al. (2020) have sequenced and analyzed the whole chloroplast genomes of five Pterocarpus species: P. macrocarpus, P. santalinus, P. indicus, P. pedatus, and P. marsupium . This study has also led to the description of chloroplastic SSR.…”
Section: Introductionmentioning
confidence: 99%
“…The protein-coding regions are highly conserved in plastid genomes [33]. We analyzed the protein-coding sequences of 79 identified unique orthologous genes in 4 Pilea taxa.…”
Section: Nucleotide Variations In Protein-coding Genesmentioning
confidence: 99%
“…The protein-coding regions are highly conserved in plastid genomes [33]. We analyzed the protein-coding sequences of 79 identi ed unique orthologous genes in 4 Pilea taxa.…”
Section: Nucleotide Variations In Protein-coding Genesmentioning
confidence: 99%