Abstract:Community-acquired pneumonia (CAP) is associated with high rates of morbidity and mortality worldwide; the annual incidence of CAP among adults in Europe has ranged from 1.5 to 1.7 per 1000 population. Intracellular bacteria are common causes of CAP. However, there is considerable variation in the reported incidence between countries and change over time. The intracellular pathogens that are well established as causes of pneumonia are Legionella pneumophila, Mycoplasma pneumoniae, Chlamydophila pneumoniae, Chl… Show more
“…Moreover, performing standard serologic tests on all patients with CAP is not common practice. The intracellular pathogens that are well-established as causes of CAP are: Legionella pneumophila , Mycoplasma pneumoniae , Chlamydophila pneumoniae , Chlamydophila psittaci and Coxiella burnetii [18,19]. No clinical features exist that make it possible to distinguish intracellular pathogens from classical pathogens (pneumococcus) in pneumonia, although extra-pulmonary manifestations are often associated with intracellular pathogens in CAP [20].…”
Section: Microbial Etiology Of Community-acquired Pneumonia (Cap)mentioning
confidence: 99%
“…A recent review article [19] reported that severe CAP caused by intracellular pathogens accounts for approximately 1% to 7% of cases [6,8,21]. Since antimicrobial therapy for severe pneumonia is empiric and covers typical pathogens and the principal intracellular pathogens, results of microbiological diagnosis have an important relationship with the clinical prognosis of pneumonia.…”
Section: Microbial Etiology Of Community-acquired Pneumonia (Cap)mentioning
Globally, pneumonia is a serious public health concern and a major cause of mortality and morbidity. Despite advances in antimicrobial therapies, microbiological diagnostic tests and prevention measures, pneumonia remains the main cause of death from infectious disease in the world. An important reason for the increased global mortality is the impact of pneumonia on chronic diseases, along with the increasing age of the population and the virulence factors of the causative microorganism. The increasing number of multidrug-resistant bacteria, difficult-to-treat microorganisms, and the emergence of new pathogens are a major problem for clinicians when deciding antimicrobial therapy. A key factor for managing and effectively guiding appropriate antimicrobial therapy is an understanding of the role of the different causative microorganisms in the etiology of pneumonia, since it has been shown that the adequacy of initial antimicrobial therapy is a key factor for prognosis in pneumonia. Furthermore, broad-spectrum antibiotic therapies are sometimes given until microbiological results are available and de-escalation cannot be performed quickly. This review provides an overview of microbial etiology, resistance patterns, epidemiology and microbial diagnosis of pneumonia.
“…Moreover, performing standard serologic tests on all patients with CAP is not common practice. The intracellular pathogens that are well-established as causes of CAP are: Legionella pneumophila , Mycoplasma pneumoniae , Chlamydophila pneumoniae , Chlamydophila psittaci and Coxiella burnetii [18,19]. No clinical features exist that make it possible to distinguish intracellular pathogens from classical pathogens (pneumococcus) in pneumonia, although extra-pulmonary manifestations are often associated with intracellular pathogens in CAP [20].…”
Section: Microbial Etiology Of Community-acquired Pneumonia (Cap)mentioning
confidence: 99%
“…A recent review article [19] reported that severe CAP caused by intracellular pathogens accounts for approximately 1% to 7% of cases [6,8,21]. Since antimicrobial therapy for severe pneumonia is empiric and covers typical pathogens and the principal intracellular pathogens, results of microbiological diagnosis have an important relationship with the clinical prognosis of pneumonia.…”
Section: Microbial Etiology Of Community-acquired Pneumonia (Cap)mentioning
Globally, pneumonia is a serious public health concern and a major cause of mortality and morbidity. Despite advances in antimicrobial therapies, microbiological diagnostic tests and prevention measures, pneumonia remains the main cause of death from infectious disease in the world. An important reason for the increased global mortality is the impact of pneumonia on chronic diseases, along with the increasing age of the population and the virulence factors of the causative microorganism. The increasing number of multidrug-resistant bacteria, difficult-to-treat microorganisms, and the emergence of new pathogens are a major problem for clinicians when deciding antimicrobial therapy. A key factor for managing and effectively guiding appropriate antimicrobial therapy is an understanding of the role of the different causative microorganisms in the etiology of pneumonia, since it has been shown that the adequacy of initial antimicrobial therapy is a key factor for prognosis in pneumonia. Furthermore, broad-spectrum antibiotic therapies are sometimes given until microbiological results are available and de-escalation cannot be performed quickly. This review provides an overview of microbial etiology, resistance patterns, epidemiology and microbial diagnosis of pneumonia.
“…Pneumonia is a common lung disease which is responsible for significant morbidity and mortality worldwide [1,2]. Community-acquired pneumonia (CAP) is the main type of pneumonia which can also result in high risk of mortality in critically-ill patients [3][4][5].…”
Purpose: To investigate the prognostic role of vitamin D in pneumonia patients through meta-analysis.
Methods: PubMed and Embase were systematically searched for relevant studies that assessed the impact of vitamin D on the risk of adverse outcomes among patients with pneumonia. Risk ratios (RR) with 95 % confidence intervals (95 % CI) were pooled using meta-analysis. Q-test and I2 statistics were used to evaluate between-study heterogeneity. (RR = 3.15, p = 0.002
Results: Six studies were finally included in the meta-analysis. The results of meta-analysis of these studies indicated that low vitamin D status was associated with higher risk of mortality among pneumonia patients (RR = 2.59, 95 % CI = 1.32-5.08; p = 0.005). Results from meta-analysis of studies with adjusted estimates suggest that low vitamin D status was independently associated with higher risk of mortality among pneumonia patients
“…In the adult population, acceptance of an AST intervention has also been associated with a trend toward reduced mortality on multivariable analysis. Moreover, nucleic acid amplification testing and mass spectrometry can identify selected antibiotic resistance patterns to vancomycin (VanA/ VanB), methicillin (MecA), cephalosporins (beta-lactamases) and carbapenem (CPE) [4].Polymerase chain reaction (PCR) is well established for the diagnosis of "atypical" pathogens in severe community-acquired pneumonia [6] and for the study of ARDS with possible infectious etiology, namely for respiratory viruses (HSV and CMV), with virus load quantification, and also for Pneumocystis and Aspergillus [5]. In a retrospective case-control study in adult ICU patients with pneumonia and severe sepsis or septic shock, a strategy with bronchoalveolar lavage (BAL) cultures plus BAL M-PCR led to higher microbiological yield and less time to antibiotic therapy modification compared to a BAL culture strategy (32.40 ± 14.41 vs. 41.74 ± 45.61 h; P < .001) [7].…”
mentioning
confidence: 99%
“…Polymerase chain reaction (PCR) is well established for the diagnosis of "atypical" pathogens in severe community-acquired pneumonia [6] and for the study of ARDS with possible infectious etiology, namely for respiratory viruses (HSV and CMV), with virus load quantification, and also for Pneumocystis and Aspergillus [5]. In a retrospective case-control study in adult ICU patients with pneumonia and severe sepsis or septic shock, a strategy with bronchoalveolar lavage (BAL) cultures plus BAL M-PCR led to higher microbiological yield and less time to antibiotic therapy modification compared to a BAL culture strategy (32.40 ± 14.41 vs. 41.74 ± 45.61 h; P < .001) [7].…”
Blood cultures are the classical gold standard for microbiological diagnosis of bloodstream infection (BSI) and sepsis. However, only 10% of blood cultures processed are positive, and finalized results typically take 48-72 h. Empirical antimicrobial therapy, administered until the etiological agent is identified and antimicrobial susceptibility test results are available, may be either excessive or inadequate, and unnecessary treatment with broadspectrum antimicrobials can lead to significant collateral damage including drug toxicity, antimicrobial drug resistance, increased length of stay, and additional cost. This is an important and relevant quality gap. It is evident that improved identification methods and practices that allow reduction of time to microbiological diagnosis and targeted therapy constitutes a major quality improvement framework in antibiotic use [1].Diagnostic techniques that do not depend on growth of organisms in culture may offer a distinct advantage over current methods. They allow shorter time to results and detection of non-cultivable microorganisms under antibiotic pressure.Two recent studies have shown that matrix-assisted laser desorption/ionization time-of-flight mass spectrometry following isolation from clinical specimens coupled with antimicrobial stewardship programme (AST) intervention decreases time to organism identification and to effective and optimal antibiotic therapy in adult [2] and pediatric patients with BSI [3]. In the adult population, acceptance of an AST intervention has also been associated with a trend toward reduced mortality on multivariable analysis. Moreover, nucleic acid amplification testing and mass spectrometry can identify selected antibiotic resistance patterns to vancomycin (VanA/ VanB), methicillin (MecA), cephalosporins (beta-lactamases) and carbapenem (CPE) [4].Polymerase chain reaction (PCR) is well established for the diagnosis of "atypical" pathogens in severe community-acquired pneumonia [6] and for the study of ARDS with possible infectious etiology, namely for respiratory viruses (HSV and CMV), with virus load quantification, and also for Pneumocystis and Aspergillus [5]. In a retrospective case-control study in adult ICU patients with pneumonia and severe sepsis or septic shock, a strategy with bronchoalveolar lavage (BAL) cultures plus BAL M-PCR led to higher microbiological yield and less time to antibiotic therapy modification compared to a BAL culture strategy (32.40 ± 14.41 vs. 41.74 ± 45.61 h; P < .001) [7].However, several criticisms have been raised with the use of real-time PCR for the study of suspected sepsis and BSI. A study showed that the post-test probability of both a positive (26.3,.7%) and a negative (5.6, 95% CI 4.1-7.4%) SeptiFast test indicated potential limitations of the technique in diagnosing BSI in patients that had been admitted for an average of 8 days in hospital and had recently received antibiotics and organ support [8]. A systematic review and meta-analysis showed that, in suspected sepsis, SeptiFast has highe...
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