Combined visualization of genomic and epidemiological data for outbreaks
Carl J.E. Suster,
Anne E. Watt,
Qinning Wang
et al.
Abstract:In epidemiological investigations, pathogen genomics can provide insights and test epidemiological hypotheses that would not have been possible through traditional epidemiology. Tools to synthesize genomic analysis with other types of data are a key requirement of genomic epidemiology. We propose a new 'phylepic' visualization that combines a phylogenomic tree with an epidemic curve. The combination visually links the molecular time represented in the tree to the calendar time in the epidemic curve, a correspo… Show more
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