2020
DOI: 10.1101/2020.02.27.968198
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Colonization with the commensal fungusCandida albicansperturbs the gut-brain axis through dysregulation of endocannabinoid signaling

Abstract: 19Anxiety disorders are the most prevalent mental health disorder worldwide, with a 20 lifetime prevalence of 5-7% of the human population. Although the etiology of anxiety 21 disorders is incompletely understood, one aspect of host health that affects anxiety 22 disorders is the gut-brain axis. We used a mouse model of gastrointestinal (GI) 23 colonization to demonstrate that the commensal fungus Candida albicans affects host 24 health via the gut-brain axis. In mice, bacterial members of the gut microbiota c… Show more

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“…Usually, nanopore sequencing achieves a higher number of taxa at the species level than Illumina sequencing (2), most likely explained by the capacity of nanopore sequencing reads to span multiple 16S rRNA variable regions (2). Indeed, nanopore sequencing approaches rely on longer reads and reference databases are mostly composed of standard and shorter gene markers, such as fragments of the 16S rRNA gene or the ITS region (3,4). Therefore, nanopore sequencing may have limited reliability in profiling unknown microbial communities, decreasing the confidence on the taxonomical composition obtained (5).…”
Section: Introductionmentioning
confidence: 99%
“…Usually, nanopore sequencing achieves a higher number of taxa at the species level than Illumina sequencing (2), most likely explained by the capacity of nanopore sequencing reads to span multiple 16S rRNA variable regions (2). Indeed, nanopore sequencing approaches rely on longer reads and reference databases are mostly composed of standard and shorter gene markers, such as fragments of the 16S rRNA gene or the ITS region (3,4). Therefore, nanopore sequencing may have limited reliability in profiling unknown microbial communities, decreasing the confidence on the taxonomical composition obtained (5).…”
Section: Introductionmentioning
confidence: 99%