The rotavirus nonstructural protein NSP1 is the least conserved protein in the rotavirus genome, and its function in the replication cycle is not known. We employed NSP1 as bait in the yeast two-hybrid interaction trap to identify candidate cellular partners of NSP1 that may provide clues to its function. Interferon regulatory factor 3 (IRF-3) was identified as an NSP1 interactor. NSP1 synthesized in rotavirus-infected cells bound IRF-3 in a glutathione S-transferase pull-down assay, indicating that the interaction was not unique to the two-hybrid system. NSP1 of murine rotavirus strain EW also interacted with IRF-3. NSP1 deletion and point mutants were constructed to map domains important in the interaction between NSP1 and IRF-3. The data suggest that a binding domain resides in the C terminus of NSP1 and that the N-terminal conserved zinc finger is important but not sufficient to mediate binding to IRF-3. We predict that a role for NSP1 in rotavirus-infected cells is to inhibit activation of IRF-3 and diminish the cellular interferon response.Rotaviruses are the most important cause of severe, often life-threatening gastroenteritis in infants and children under 2 years of age (33). These viruses are ubiquitous in nature and are also responsible for a significant proportion of neonatal diarrheal illness in domestic animals, particularly in bovine and porcine species (18,40). Substantial research efforts have thus focused on understanding the correlates of a protective immune response to rotavirus infection and the molecular mechanisms of virus replication so that efficacious vaccines can be developed.The rotavirus segmented double-stranded RNA genome encodes six structural proteins (VP) and six nonstructural proteins (NSP) (reviewed in reference 17). The structural proteins VP1, VP2, VP3, VP4, VP6, and VP7 are well characterized in terms of their antigenic, structural, and biochemical properties. The functions of the rotavirus nonstructural proteins NSP1 to NSP6 are less well defined with regard to the roles that these proteins play in the rotavirus replication cycle. Intriguing functions have recently been described for some. NSP3 binds the 3Ј consensus sequence of viral mRNAs (37) and acts as a functional analog of poly(A) binding protein through its interaction with eIF4GI (36). NSP4 is both an intracellular glycoprotein receptor for maturating rotavirus particles that bud through the endoplasmic reticulum (3, 32) and a viral enterotoxin that induces diarrhea in mice in the absence of any other viral protein (5). Functions of the remaining nonstructural proteins, NSP1, NSP2, NSP5, and NSP6, have been proposed based predominately on biochemical properties and activities of recombinant proteins (reviewed in reference 17).NSP1 displays several interesting properties that warrant investigation. NSP1 has a calculated molecular weight of approximately 54,000 and is the least conserved protein encoded by the rotavirus genome when NSP1s of different strains are compared (23,34). The N terminus contains a conserved ...