CLAW: An automated Snakemake workflow for the assembly of chloroplast genomes from long-read data
Aaron L. Phillips,
Scott Ferguson,
Rachel A. Burton
et al.
Abstract:Chloroplasts are photosynthetic organelles in algal and plant cells that contain their own genome. Chloroplast genomes are commonly used in evolutionary studies and taxonomic identification and are increasingly becoming a target for crop improvement studies. As DNA sequencing becomes more affordable, researchers are collecting vast swathes of high-quality whole-genome sequence data from laboratory and field settings alike. Whole tissue read libraries sequenced with the primary goal of understanding the nuclear… Show more
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