“…This duality blurs the definition of a commensal member of the respiratory tract. Instead, it's likely that this body site harbours an indigenous microbiota whose members behave differently, depending on factors such as their location in the body (Blaser and Falkow, 2009), bacterial community disturbance (Lynch, 2013), environmental pressures (Feldman and Anderson, 2013) and/or immune responses in the host (Starkey et al, 2013). Unlike many acute infectious diseases where a single microbe can be targeted and eradicated, lung infections are often polymicrobial (Bakaletz, 2004;Han et al, 2012;Huang et al, 2012Huang et al, , 2014Dickson et al, 2013) and the organisms recovered from respiratory and invasive infections are often a mixture of common URT microbes (Laupland et al, 2000, Sibley et al, 2008.…”