Here we study the influence of the putative fatty acid biosynthesis (FAB) regulator FabT (originally called RmaG [Llmg_1788]) on gene transcription in Lactococcus lactis MG1363. A strain with a knockout mutation of the putative regulator was constructed, and its transcriptome was compared to that of the wild-type strain. Almost all FAB genes were significantly upregulated in the knockout. Using electrophoretic mobility shift assays (EMSAs) and DNase I footprinting, the binding motif of the regulator and the binding locations in the genome were characterized. Fatty acid composition analysis revealed that a strain lacking FabT contained significantly more saturated acyl chains in its phospholipids. This observation demonstrates that the vital pathway of FAB in L. lactis is regulated by the repressor FabT.
Membrane phospholipids are essential for life; they contain a hydrophilic head group and two hydrophobic tails esterified to a glycerol moiety. The hydrophobic tail is usually composed of a stretch of hydrocarbons denoted as acyl chains. Biosynthesis of saturated fatty acids (SFA) in bacteria is performed by multiple conserved enzymes in a multistep process. Based on the sequence similarity of genes in the fab regulon, we describe here the most likely fatty acid biosynthesis (FAB) route in Lactococcus lactis. The acetyl coenzyme A (acetyl-CoA) carboxylase (ACC) complex, consisting of AccABCD, catalyzes an acetyl-CoA-into-malonylCoA conversion (1). The CoA is replaced by an acyl-carrier protein (ACP) by FabD, a malonyl-CoA:ACP transacylase (2). Fatty acid elongation rounds are initiated by FabH (-ketoacyl-ACP synthase III) by condensing an acetyl-CoA with malonyl-ACP (3). The first reductive step in the FAB elongation is performed by -ketoacyl-ACP reductase (FabG) producing -ketoacyl-ACP and NADP Ϫ (4). This -ketoacyl-ACP is dehydrated by FabZ (-hydroxyacyl-ACP dehydratase), resulting in a trans-2-enoyl-ACP (5, 6). The final step in lactococcal FAB elongation is a second reduction step executed by trans-2-enoyl-ACP reductase I FabI, giving an acyl-ACP (7,8). Further elongation rounds start by the condensation enzyme FabF -ketoacyl-ACP synthase II through the addition of an acyl group from malonyl-ACP (9, 10). The resulting -ketoacyl-ACP can continue through the elongation cycle by reduction by FabG again. For L. lactis, no enzymes that can process the acyl-ACP into phospholipids are identified. The only protein is PlsX, annotated in L. lactis as a putative acyltransferase. Investigations on PlsX from Bacillus subtilis showed that the enzyme is able to form acylphosphate from acyl-ACP (11,12).FAB has been shown to be a coordinated process in the model organisms Escherichia coli and B. subtilis, in which FAB is under tight control of the transcriptional regulators FadR/FabR and FapR, respectively (13). The bifunctional E. coli FadR activates the essential gene fabA (14). When sufficient amounts of long-chain acyl-CoA have been produced, some of these molecules bind to FadR, which results in derepression of th...