Characterization and fine mapping of <i>nonstop glumes 2</i> (<i>nsg2</i>) mutant in rice (<i>Oryza sativa</i> L.)

Abstract

In cereal crops, the grain number per panicle and the grain yield are greatly affected by the number of florets in a spikelet. In wild-type rice, a spikelet only produces one fertile floret and beneath the floret are a pair of sterile lemmas and a pair of rudimentary glumes. This study characterized a rice spikelet mutant nonstop glumes 2 (nsg2). In the nsg2 mutant, both the sterile lemmas and rudimentary glumes were elongated, and part of sterile lemma looked like a lemma in appearance, shape and size. Detailed histological analysis and qPCR analysis revealed that the sterile lemmas in the nsg2 mutant had homeotically transformed into lemma-like organs. This phenotype indicates that NSG2 is involved in the regulation of spikelet development and supports the long-held view that sterile lemmas were derived from the lemmas of the two lateral florets. This implies that the rice spikelet has the potential to be restored to the "three florets spikelet", which may have existed in its ancestors. Genetic analysis reveals that the nsg2 trait is controlled by a single recessive gene. The NSG2 gene was finally mapped between markers R-20 and R-39 on chromosome 7 with a physical region of 180 kb. The two MYB family factors LOC_Os07g44030 and LOC_Os07g44090 might be involved in the development of the spikelet and floral organ, and they were considered as candidate genes of NSG2. These results provide a foundation for map-based cloning and function analysis of NSG2, as well as evidence to support "three-florets spikelet" breeding in rice.

Genotyping-by-sequencing and genome-wide association study reveal genetic diversity and loci controlling agronomic traits in triticale

“…The functions of 16 genes were associated with the related traits (Table 1). (Li et al 2019;Li et al 2020). The gene encoding GS3/putative transmembrane protein is a major gene for grain length and weight in rice (Fan et al 2006).…”

Genotyping-by-sequencing and genome-wide association study reveal genetic diversity and loci controlling agronomic traits in triticale

“…transcripts TraesCS3B02G286500.1 and TraesCS7A02G301900.1, annotated as myb-related protein Hv33-like and DNA-directed RNA polymerase II subunit RPB1, respectively(Li et al 2019;Li et al 2020). The gene encoding GS3/putative transmembrane protein is a major gene for grain length and weight in rice(Fan et al 2006).…”