We have previously reported a dystrophinrelated locus (DMDL for Duchenne muscular dystrophy-like) on human chromosome 6 that maps close to the dy mutation on mouse chromosome 10. Here we show that this gene is expressed in a wide range of tissues at varying levels. The transcript is particularly abundant in several human fetal tissues, including heart, placenta, and intestine. Studies with antisera raised against a DMDL fusion protein identify a 400,000 Mr protein in all mouse tissues tested, including those of mdx and dy mice. Unlike the dystrophin gene, the DMDL gene transcript is not differentially spliced at the 3' end in either fetal muscle or brain.Dystrophin has been identified as the protein product defective in Duchenne muscular dystrophy (DMD); however, very little is known about its precise function (1-3). Sequence comparisons have revealed features in common with cytoskeletal proteins. The amino-terminal region of dystrophin shows homology to the actin binding region of a-actinin (4,5) and the central rod domain shows structural similarities to the triple helical configuration of spectrin (6). In contrast, the carboxyl-terminal domain of 420 amino acids does not show homology to any previously characterized proteins. This latter domain is thought to be important in the integration of dystrophin into a glycoprotein complex localized at the muscle membrane surface (7,8). The carboxyl-terminal region of the gene is differentially spliced in muscle and brain, which suggests the production of isoforms with differing interactions with membrane proteins (9). In addition, this region of dystrophin is important for the correct functioning of the molecule in vivo as deletions covering this domain result in DMD rather than the milder Becker muscular dystrophy (10)(11)(12)(13).Recently, we demonstrated the existence of an mRNA in human fetal muscle that shares a high degree of sequence homology with the carboxyl-terminal region of dystrophin (14). The gene encoding this transcript is localized to human chromosome 6 and the locus has been designated DMDL for DMD-like in Human Gene Mapping 10 (15). The DMDL gene shares structural similarities with dystrophin: the transcript is large, 13 kilobases (kb), and is multiexonic with a similar distribution of 3' exons and introns.Although no human disease has yet been attributed to mutations at the DMDL locus, the mouse homologue of this gene, designated Dmdl, has been shown to be syntenic with the dy (dystrophia muscularis) locus on mouse chromosome 10 (16). The dy mutation is recessive and results in a severe neuromuscular disease in the mouse in which skeletal muscle shows degenerative changes (17). These observations suggest that the Dmdl gene may be a candidate for the dy mutation.In this paper, we present the tissue distribution of the DMDL transcript in humans and compare this distribution with the presence of a 400,000 Mr protein in mouse tissues. We also investigate the occurrence ofthe DMDL polypeptide in liver and muscle of mice with mutations in the dy...