“…Despite the increasing evidence that normalizing real-time RT-PCR data to a single reference gene may be inappropriate, many authors continue to do so without proper validation (Bustin and Benes, 2005). Indeed, the majority of papers in our area of interest (traumatic brain injury; TBI) describe the use of a single reference gene, such as GAPDH, cyclophilin, b-actin, or 18S ribosomal RNA (Li et al, 2004;Larner et al, 2005;Pascale et al, 2006;Shein et al, 2007;Sifringer et al, 2007;Yao et al, 2007;Brown et al, 2008), usually without including a reference gene validation protocol. Because the expression of these reference genes has been shown to vary across different experimental situations (Zhong and Simons, 1999;Schmittgen and Zakrajsek, 2000), it is uncertain whether these studies have measured a true change in the mRNA of interest or whether data analysis has been influenced by the variability of the reference gene.…”