2022
DOI: 10.1016/j.celrep.2022.111146
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Cardiac ultrastructure inspired matrix induces advanced metabolic and functional maturation of differentiated human cardiomyocytes

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Cited by 15 publications
(14 citation statements)
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“…Gene set enrichment analysis (GSEA) ( Subramanian et al, 2005 ) were performed on the genes that are downstream of Mrtf ( Gualdrini et al, 2016 ). Hierarchical clustering was performed using UPGMA method with Euclidian distance on z-scores as mentioned earlier ( Afzal et al, 2022 ). Briefly, a subset of genes was selected for clustering that were differentially expressed in either condition, and are known to be downstream of SRF-MRTF or SRF-TCF axis ( Gualdrini et al, 2016 ; Esnault et al, 2017 ).…”
Section: Methodsmentioning
confidence: 99%
See 1 more Smart Citation
“…Gene set enrichment analysis (GSEA) ( Subramanian et al, 2005 ) were performed on the genes that are downstream of Mrtf ( Gualdrini et al, 2016 ). Hierarchical clustering was performed using UPGMA method with Euclidian distance on z-scores as mentioned earlier ( Afzal et al, 2022 ). Briefly, a subset of genes was selected for clustering that were differentially expressed in either condition, and are known to be downstream of SRF-MRTF or SRF-TCF axis ( Gualdrini et al, 2016 ; Esnault et al, 2017 ).…”
Section: Methodsmentioning
confidence: 99%
“…Measurement of oxidative phosphorylation and glycolysis: XF analyzer from Agilent Technologies was used to monitor cellular energetics ( Reid et al, 2013 ; Afzal et al, 2017 ; Afzal et al, 2022 ). Cells were cultured in 96 wells XF plate and the assay was repeated three times to estimate the energetics of cells.…”
Section: Methodsmentioning
confidence: 99%
“…The most commonly adopted method to engineer the culture geometry is micropatterning of the substrates, which include polydimethylsiloxane (PDMS) ( Rao et al, 2013 ), polylactide-co-glycolide (PLGA) ( Khan et al, 2015 ), Matrigel ( Ribeiro et al, 2015 ), or polyacrylamide (PAA) hydrogel ( Strimaityte et al, 2022 ), using techniques such as electrospinning, photolithography, laser cutting, microcontact, even tissue-specific bio-3D printing ( Rao et al, 2013 ; Salick et al, 2014 ; Khan et al, 2015 ; Ribeiro et al, 2015 ; Rodriguez et al, 2019 ; Yu et al, 2019 ; Strimaityte et al, 2022 ). Recently, another group has developed a matrix mimicking various chemical and physical properties of native heart matrices, including a purposely designed substrate whose ultrastructure resembles the collagen network in natural human hearts ( Afzal et al, 2022 ). These micropatterned substrates generally possess microarchitectures similar to the morphology or organization of mammal (preferably human) adult CMs or decellularized myocardium, serving as scaffolds which guide the geometric growth of hSC-CMs.…”
Section: Mechanical Cuesmentioning
confidence: 99%
“…While studies have shown that culturing hSC-CMs on substrates with micropatterns that resemble the microstructure of adult CMs can improve maturation, traditional micropatterning methods are typically limited to two-dimensional (2D) substrates. Indeed, 2D systems have unique advantages, such as easy access to studying signaling pathways, metabolic features, and organelle behaviors, and to facilitating high-throughput drug screening ( Afzal et al, 2022 ). However, they cannot adequately represent the native three-dimensional (3D) environment in which human hearts develop.…”
Section: Mechanical Cuesmentioning
confidence: 99%
“…These topographies have been shown to enhance CM maturation by promoting better cell alignment and attachment. 35,36 Cross-sectional scanning electron microscopy (SEM) images provided further insights into the effect of the P(NDI2OD-T2) coating on the interactions between the Matrigel and the substrate. Samples were prepared by coating the Matrigel on bare SEM stubs and P(NDI2OD-T2)-coated stubs with cryogenic treatment that preserves the protein structure before freeze-fracturing for imaging.…”
Section: ■ Introductionmentioning
confidence: 99%