Background:
The distal convoluted tubule (DCT) comprises two subsegments, DCT1 and DCT2, with different functional and molecular characteristics. The functional and molecular distinction between these segments, however, has been controversial.
Methods:
To understand the heterogeneity within the DCT population with better clarity, we enriched for DCT nuclei by using a mouse line combining “Isolation of Nuclei TAgged in specific Cell Types” and NCC (sodium chloride cotransporter)-driven inducible Cre recombinase. We sorted the fluorescently labeled DCT nuclei using Fluorescence-Activated Nucleus Sorting, and performed single nucleus transcriptomics.
Results:
Among 25,183 DCT cells, 75% were from DCT1 and 25% from DCT2. Additionally, there was a small population (<1%) enriched in proliferation-related genes, such as Top2a, Cenpp, and Mki67. Although both DCT1 and DCT2 express NCC, magnesium transport genes are predominantly expressed along DCT1, whereas calcium, electrogenic sodium and potassium transport genes are more abundant along DCT2. The transition between these two segments is gradual with a transitional zone in which DCT1 and DCT2 cells are interspersed. The expression of the homeobox genes by DCT cells suggests that they develop along different trajectories.
Conclusions:
Transcriptomic analysis of an enriched rare cell population using a genetically targeted approach clarifies the function and classification of distal cells. The DCT segment is short, yet, can be separated into two sub-segments that serve distinct functions, and are speculated to derive from different origins during development.