High affinity binding of Ca2؉ to ␣-lactalbumin (LA) stabilizes the native structure and is required for the efficient generation of native protein with correct disulfide bonds from the reduced denatured state. A progressive increase in affinity of LA conformers for Ca 2؉ as they develop increasingly native structures can account for the tendency of the apo form to assume a molten globule state and the large acceleration of folding by Ca 2؉ . To investigate the effect of calcium on structure of bovine LA, x-ray structures have been determined for crystals of the apo and holo forms at 2.2-Å resolution. In both crystal forms, which were grown at high ionic strength, the protein is in a similar global native conformation consisting of ␣-helical and -
␣-Lactalbumin (LA)1 is the regulatory protein of lactose synthase (1-3), modulating the affinity of the catalytic component, UDP-galactose -N-acetylglucosaminide 1,4-galactosyltransferase I, for acceptor substrates through a reversible proteinprotein interaction (4). LA is also secreted into milk and aggregates of a partially folded form of the human protein have been found to have selective apoptotic effects on tumor cells (5). LA is homologous with the c-type lysozymes (LZs) (6) and provides an example of extreme functional divergence in homologous proteins with closely similar structures (7-9). LA binds calcium strongly and specifically but the LZs include subgroups that bind Ca 2ϩ at a site corresponding to that in LA and others ("conventional" LZs) that lack a Ca 2ϩ -binding site (10). The K d app for Ca 2ϩ binding to apo-LA under physiological conditions is of the order of 10 Ϫ7 M (11-13). The Ca 2ϩ ion in LA has a structural role, being required for folding and native disulfide bond formation in the reduced denatured protein (14, 15). At ambient temperature and low ionic strength, apo-LA undergoes a transconformation to a molten globule (MG) state, which lacks a fixed tertiary structure but retains much of the native secondary structure. The MG is also stabilized by mildly disruptive treatments such as low pH or intermediate concentrations of denaturants (16,17); it is also identical to a kinetic MG that is highly populated during the refolding of chemically denatured LA (18 -20).Crystal structures of holo-LA from various species in different crystal forms and metal complexes (7,8,(21)(22)(23)(24)(25)(26) are similar to those of the homologous LZs, with two lobes of structure separated by a cleft (Fig. 1A). The larger ␣-helical lobe is formed by the amino-and carboxyl-terminal sections of the polypeptide chain (residues 1-34 and 86 -123) while the smaller lobe, which encompasses a small three-stranded antiparallel -sheet, a small 3 10 helix and some irregular structure, is formed by the central section of the polypeptide chain (residues 35-85). We refer to the lobes as "subdomains" since they lack properties normally expected of true domains such as sequence contiguity and distinct functional properties and origins. The high affinity Ca 2ϩ -binding site is l...