Abstract:Background
Endometrial carcinoma (EC) is one of the three major malignant tumors of the female reproductive system. In recent years, the incidence and mortality rate of EC have increased. B-cell translocation gene 1 (BTG1) is an anti-proliferation gene that regulates the occurrence and development of a variety of tumors, but there is no research regarding this gene in EC.
Methods
Based on The Cancer Genome Atlas (TCGA) database, we used a variety of bioinformatics tools and databases to explore the expressio… Show more
“…Another study based on RNA-seq data reported that 542 patients had high RNF183 expression, which was associated with favorable overall survival and progression-free survival [48]. It was similar in the study by Li et al, where higher OS was noted in patients with high BTG1 expression [50]. In turn, high expression of HOXB9 and E2F3 correlated with a shorter survival time [51].…”
Section: Kaplan-meier Plotter Databasesupporting
confidence: 65%
“…In a recent endometrial cancer study, 581 TCGA tissue samples, including 546 EC samples and 35 normal endometrial samples, were used during analysis. Expression of TMEFF2 [47] and BTG anti-proliferation factor 1 (BTG1) [50] was lower in primary endometrial cancer compared to the healthy endometrium, while significant overexpression was noted for ring finger protein 183 (RNF183) [48]. In turn, the ZBTB7A expression was low in endometrial cancer tissues grouped according to cancer stage, age, and race compared to the control group [49].…”
Section: Ualcan Databasementioning
confidence: 97%
“…Interestingly, the expression of RNF183 and BTG1 was higher in endometrioid EC compared to the non-endometrioid subtypes. In addition, analyses using the Oncomine database also allowed observing a high expression of RNF183 and BTG1 in TP53-Non-Mutant EC compared to TP53-Mutant EC [48,50].…”
Section: Ualcan Databasementioning
confidence: 99%
“…The analysis performed for the BTG1 gene revealed strong correlations between the expression of BTG1 and SH3 domain-binding glutamic acid-rich-like protein 3 (SH3BGRL), protein-L-isoaspartate O-methyltransferase domain-containing protein 1 (PCMTD1), and tetmethylcytosine dioxygenase 2 (TET2). Moreover, taking into account the top 50 gene sets related to BTG1, their functions include the regulation of cell cycle, apoptosis, and carcinogenesis [50].…”
Section: Linkedomics Databasementioning
confidence: 99%
“…In recent endometrial cancer research, the LinkedOmics database has been used to find networks of miRNA targets, as was already described in detail [47,48]. In addition, Li et al used the miRDB database (http://mirdb.org) (accessed on 1 December 2021) in their study, as it allows the prediction of miRNA targets and functional annotation [50,73]. The aim of the study was to select miRNAs that can bind to BTG1.…”
Endometrial cancer is the most common gynecological cancers in developed countries. Many of the mechanisms involved in its initiation and progression remain unclear. Analysis providing comprehensive data on the genome, transcriptome, proteome, and epigenome could help in selecting molecular markers and targets in endometrial cancer. Multiomics approaches can reveal disturbances in multiple biological systems, giving a broader picture of the problem. However, they provide a large amount of data that require processing and further integration prior to analysis. There are several repositories of multiomics datasets, including endometrial cancer data, as well as portals allowing multiomics data analysis and visualization, including Oncomine, UALCAN, LinkedOmics, and miRDB. Multiomics approaches have also been applied in endometrial cancer research in order to identify novel molecular markers and therapeutic targets. This review describes in detail the latest findings on multiomics approaches in endometrial cancer.
“…Another study based on RNA-seq data reported that 542 patients had high RNF183 expression, which was associated with favorable overall survival and progression-free survival [48]. It was similar in the study by Li et al, where higher OS was noted in patients with high BTG1 expression [50]. In turn, high expression of HOXB9 and E2F3 correlated with a shorter survival time [51].…”
Section: Kaplan-meier Plotter Databasesupporting
confidence: 65%
“…In a recent endometrial cancer study, 581 TCGA tissue samples, including 546 EC samples and 35 normal endometrial samples, were used during analysis. Expression of TMEFF2 [47] and BTG anti-proliferation factor 1 (BTG1) [50] was lower in primary endometrial cancer compared to the healthy endometrium, while significant overexpression was noted for ring finger protein 183 (RNF183) [48]. In turn, the ZBTB7A expression was low in endometrial cancer tissues grouped according to cancer stage, age, and race compared to the control group [49].…”
Section: Ualcan Databasementioning
confidence: 97%
“…Interestingly, the expression of RNF183 and BTG1 was higher in endometrioid EC compared to the non-endometrioid subtypes. In addition, analyses using the Oncomine database also allowed observing a high expression of RNF183 and BTG1 in TP53-Non-Mutant EC compared to TP53-Mutant EC [48,50].…”
Section: Ualcan Databasementioning
confidence: 99%
“…The analysis performed for the BTG1 gene revealed strong correlations between the expression of BTG1 and SH3 domain-binding glutamic acid-rich-like protein 3 (SH3BGRL), protein-L-isoaspartate O-methyltransferase domain-containing protein 1 (PCMTD1), and tetmethylcytosine dioxygenase 2 (TET2). Moreover, taking into account the top 50 gene sets related to BTG1, their functions include the regulation of cell cycle, apoptosis, and carcinogenesis [50].…”
Section: Linkedomics Databasementioning
confidence: 99%
“…In recent endometrial cancer research, the LinkedOmics database has been used to find networks of miRNA targets, as was already described in detail [47,48]. In addition, Li et al used the miRDB database (http://mirdb.org) (accessed on 1 December 2021) in their study, as it allows the prediction of miRNA targets and functional annotation [50,73]. The aim of the study was to select miRNAs that can bind to BTG1.…”
Endometrial cancer is the most common gynecological cancers in developed countries. Many of the mechanisms involved in its initiation and progression remain unclear. Analysis providing comprehensive data on the genome, transcriptome, proteome, and epigenome could help in selecting molecular markers and targets in endometrial cancer. Multiomics approaches can reveal disturbances in multiple biological systems, giving a broader picture of the problem. However, they provide a large amount of data that require processing and further integration prior to analysis. There are several repositories of multiomics datasets, including endometrial cancer data, as well as portals allowing multiomics data analysis and visualization, including Oncomine, UALCAN, LinkedOmics, and miRDB. Multiomics approaches have also been applied in endometrial cancer research in order to identify novel molecular markers and therapeutic targets. This review describes in detail the latest findings on multiomics approaches in endometrial cancer.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.