Acyclic derivatives of adenine, known as highly effective nucleotide analogs with broad spectrum antiviral activity, were evaluated for potential cross-reactivity with adenylyl cyclases, a family of membrane-bound enzymes that share putative topologies at their catalytic sites with oligonucleotide polymerases and reverse transcriptases. A series of derivatives of 9-(2-phosphonylmethoxyethyl)adenine (PMEA) inhibited a preparation of adenylyl cyclase derived from rat brain with IC 50 values that ranged from 66 M (PMEA) to 175 nM for its diphosphate derivative (PMEApp) and mimics of it. PMEApp mimics included PMEAp(NH)p, PMEAp(CH 2 )p, PMEAp(CX 2 )p (X ؍ fluorine, chlorine, or bromine), PMEAp(CHX)pp, and PMEAp(C(OH)CH 3 pp. The data suggest that inhibition of adenylyl cyclases may contribute to the therapeutic action of some of these or similar compounds or constitute part of their side effects in therapeutic settings.Adenylyl cyclases are a family of membrane-bound enzymes central to one of the most important signal transduction systems and influence regulation of cell function in virtually all cells. The putative membrane topology of adenylyl cyclases conforms to a repeated sequence of a six-membrane spanning region followed by a cytosolic domain (1). The two cytosolic domains (C 1 and C 2 ) are homologous and contain regions that are highly conserved among adenylyl cyclase isozymes (1). The cleft formed by interaction of C 1 and C 2 contains the enzyme catalytic site (2, 3), the topology of which resembles aspects of the palm domain of DNA polymerases and human immunodeficiency virus (HIV) 1 reverse transcriptase (4 -7). Moreover, aspects of the catalytic mechanisms of adenylyl cyclases and enzymes involved in polymerization of oligonucleotides are similar as well. Each involves nucleoside triphosphate as substrate and divalent cation-dependent catalysis that includes attack involving the substrate 3Ј-OH group, to catalyze either chain elongation of a primer oligonucleotide or formation of the 3Ј:5Ј-cyclic phosphate, with pyrophosphate as a leaving group. Adenine nucleoside 3Ј-polyphosphates are among the most potent inhibitors of adenylyl cyclases (8 -11) and of these 2Ј-d-