Various point mutations of lysyl residues in yeast mitochondrial porin (283 residues) were tested for their ability to assemble in vitro into the outer membranes of intact yeast mitochondria. Assembly was evaluated by protection from proteinases. The extent of assembly of two of the mutants, K234E and K236E porins, was much less than for wild-type in either post-translational or co-translational assembly assays. Lysine to glutamate mutants at other positions and K234R porin assembled as well as wild-type, but K234Q porin was poorly inserted. When both Lys-234 and Lys-236 were mutated, K234R/K236R porin was inserted better than K234Q/ K236Q porin, which was inserted better than K234E/ K236E; however, none of these mutants assembled as well as wild-type porin. It was concluded that optimal assembly of yeast porin depended on the presence of positively charged residues at both positions 234 and 236 and a lysine at one of these positions. After undergoing the assembly reaction, mutants that were vulnerable to proteinase K (i.e. K234E, K234Q, and K236E porins) seemed to be incompletely digested and were, to varying degrees, resistant to extraction by Na 2 CO 3 (pH 11.5). These experiments suggested that these mutants were incompletely inserted into the outer membrane. Both Lys-234 and Lys-236 are included in an internal pentapeptide, VKAKV, that is conserved in porins from protists, plants, and animals, and it is possible that, at least, the lysines in this tract are one of the signals for the membrane assembly of these proteins.Mitochondrial porin (i.e. the 283-residue mitochondrial outer membrane voltage dependent anion channel) forms large holes in the mitochondrial outer membrane that permit the passage of metabolites necessary for reactions that occur in the interior compartments of mitochondria (for review, see Ref. 1). It is likely that each channel is formed by a single M r 31,000 porin polypeptide (2). Although the tertiary structure of eukaryotic porin is still unknown, it is thought to be largely comprised of amphipathic -strands in the form of a -barrel. This conclusion is based in part on observations that fungal porin does not contain sufficiently long hydrophobic tracts to serve as membrane anchors (3) and in part, in analogy with the known structures of bacterial porins (4, 5). The distribution of amino acid residues that contribute to the channel properties of porin has been interpreted to mean that yeast porin has 13 membrane spanning tracts: a single amphipathic ␣-helix and 12 amphipathic -strands (6). According to this model, charged amino acids in the membrane spanning tracts line the aqueous pore.Mitochondrial porins are encoded by nuclear genes and synthesized by cytosolic ribosomes. Porin has been shown to assemble in vitro by both post-translational (7-9) and co-translational processes (10). Porin assembly is independent of the mitochondrial membrane potential but it seems to depend on energy in the form of ATP (3, 9, 11). As is the case for other outer membrane proteins, the mature (i.e. ...