Aims/hypothesis Peroxisome proliferator-activated receptor γ (PPARγ), encoded by the PPARG gene, regulates insulin sensitivity and adipogenesis, and may bind polyunsaturated fatty acids (PUFA) and thiazolidinediones in a liganddependent manner. The PPARG proline for alanine substitution at position 12 (Pro12Ala polymorphism) has been related with obesity directly and via interaction with PUFA. Methods We tested the effect-modifying role of Pro12Ala on the 1 year change in obesity-related traits in a randomised clinical trial of treatment with metformin (n=989), troglitazone (n =363) or lifestyle modification (n=1,004) vs placebo (n=1,000) for diabetes prevention in high-risk individuals.Results At baseline, Ala12 carriers had larger waists (p<0.001) and, in a subset, more subcutaneous adipose tissue (SAT; lumbar 2/3; p=0.04) than Pro12 homozygotes. There was a genotype-by-intervention interaction on 1-year weight change (p = 0.01); in the placebo arm, Pro12 homozygotes gained weight and Ala12 carriers lost weight (p=0.001). In the metformin and lifestyle arms, weight loss occurred across genotypes, but was greatest in Ala12 Diabetologia