The c-KIT receptor tyrosine kinase is constitutively activated and oncogenic in the majority of gastrointestinal stromal tumors. The identification of selective inhibitors of c-KIT, such as imatinib, has provided a novel therapeutic approach in the treatment of this chemotherapy refractory tumor. However, despite the clinical importance of these findings and the potential it provides as a model system for understanding targeted therapy, this approach has not yielded curative outcomes in most patients, and the biochemical pathways connecting c-KIT inhibition to cell death are not completely understood. Here, we show that inhibition of c-KIT with imatinib in gastrointestinal stromal tumors (GISTs) triggered the up-regulation of the proapoptotic protein BIM via both transcriptional and post-translational mechanisms. The inhibition of c-KIT by imatinib increased levels of the dephosphorylated and deubiquitinated form of BIM as well as triggered the accumulation of the transcription factor FOXO3a on the BIM promoter to activate transcription of BIM mRNA. Furthermore, using RNA interference directed against BIM, we demonstrated that BIM knockdown attenuated the effects of imatinib, suggesting that BIM functionally contributes to imatinib-induced apoptosis in GIST. The identification and characterization of the pathways that mediate imatinib-induced cell death in GIST provide for a better understanding of targeted therapy and may facilitate the development of new therapeutic approaches to further exploit these pathways.Therapies that selectively target essential molecular pathways of cancer cells possess the potential to increase the effectiveness of therapy while decreasing the side effects associated with traditional cytotoxic chemotherapy. One example that has evoked considerable interest in both the laboratory and clinic is the identification in GI stromal tumors of activating mutations in the c-KIT (v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog) receptor tyrosine kinase gene coupled with the development of targeted c-KIT inhibitors such as imatinib (1). Gastrointestinal stromal tumors (GISTs) 2 are the most common mesenchymal tumor of the gastrointestinal tract, and ϳ80% of GISTs harbor activating c-KIT mutations (2). While surgical resection of localized disease can be curative, GISTs are poorly responsive to cytotoxic chemotherapy, and for metastatic disease, there were few therapeutic options prior to the advent of targeted c-KIT therapies (2). However, although ϳ80% of patients with metastatic GIST respond to imatinib therapy, responses are rarely complete, and patients eventually progress on therapy, often due to the development of secondary, imatinib-resistant c-KIT mutations (3).Evidence suggests that activated c-KIT drives GIST cell survival through multiple pathways and that the specific c-KIT mutation type may influence the degree of activation of the different downstream signal transduction pathways (4). Accordingly, the key downstream mediators of imatinib-induced cell death in GISTs ...