Biological control of melanin biosynthesis pathway on prolific and pleochromatic induction of Lasiodiplodia theobromae

Liu, Yuansong; Chen, Yunyun; Yu, Zhiming; Zhang, Yang

doi:10.1007/s00203-022-03396-6

Cited by 2 publications

(1 citation statement)

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“…The data described in this Data note were deposited under NCBI BioProject ID PRJNA1030934 [19][20][21][22][23]. Associated Datafiles are available on Figshare: Table S1, Genome assembly and annotation features of Lasiodiplodia pseudotheobromae isolates [18], Figure S1, Venn diagram [19], Figure S2, Phylogenetics analyses [20].…”

Section: Author Contributionsmentioning

confidence: 99%

High-quality genome resource of Lasiodiplodia pseudotheobromae associated with die-back on Eucalyptus trees

Lu,

Li,

Liu

2024

BMC Genom Data

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Objectives Lasiodiplodia pseudotheobromae is an important fungal pathogen associated with die-back, canker and shoot blight in many plant hosts with a wide geographic distribution. The aim of our study was to provide high-quality genome assemblies and sequence annotation resources of L. pseudotheobromae, to facilitate future studies on the systematics, population genetics and genomics of the fungal pathogen L. pseudotheobromae. Data description High-quality genomes of five L. pseudotheobromae isolates were sequenced based on Oxford Nanopore technology (ONT) and Illumina HiSeq sequencing platform. The total size of each assembly ranged from 43 Mb to 43.86 Mb and over 11,000 protein-coding genes were predicted from each genome. The proteins of predicted genes were annotated using multiple public databases, among the annotated protein-coding genes, more than 4,300 genes were predicted as potential virulence genes by the Pathogen Host Interactions (PHI) database. Moreover, the genome comparative analysis among L. pseudotheobromae and other closely related species revealed that 7,408 gene clusters were shared among them and 152 gene clusters unique to L. pseudotheobromae. This genome and associated datasets provided here will serve as a useful resource for further analyses of this fungal pathogen species.

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Section: Author Contributionsmentioning

confidence: 99%