The overall objective of the dissertation research was to determine if naturally occurring proteins/peptides, following oral ingestion, elicit antimicrobial activity in vivo. An initial study was designed to validate the sensitivity and precision of an in vitro antimicrobial assay, to evaluate the efficacy of natural animal proteins/peptides to kill in vitro antibioticresistant and-susceptible bacteria, and to measure the effects of key components of animal digesta on the antimicrobial activity of these proteins/peptides. A radial diffusion assay using a lawn of a known bacteria grown in low electroendosmosis agar with the tested peptide placed into wells within the agar was utilized. Using the antimicrobial assay, the minimum inhibitory concentrations (MICs) of polymyxin B (control antibiotic) for Escherichia coli, Escherichia coli (nalidixic acid-resistant), and Staphylococcus aureus were 0.76, 0.76, and 0.90 (ig/mL. respectively. The intra-and inter-assay variations for MIC determination were 0.18 fig/mL and 0.2 |ig/mL. respectively. The natural animal proteins and peptides (lactoferrin, lactoferricin B, hen egg lysozyme, and alpha-lactalbumin LDT2) were assessed in vitro (acetic acid medium) for their ability to kill selected bacteria. Each of the tested proteins/peptides was active against a nalidixic acid-resistant strain of E. coli; however, the required concentrations for antimicrobial activity were 10 to 15 times higher than that of the non-isogenic. nalidixic-acid-susceptible strain. The antimicrobial activity of each protein/peptide in animal digesta fluid was 130 to 300 % greater than that in the acetic acid buffer. Lactoferrin activity was decreased (P<.07) when exposed to zinc, iron, magnesium, calcium, sodium, or potassium compared to the nontreated control. The antimicrobial activity of lysozyme was increased (P<.09) in the presence of zinc, magnesium, or calcium. The change in digesta pH from 6.5 to 2.4 resulted in a loss of antimicrobial activity of 65% for